Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2056 ATGGCTTCTACAAACCTCTCTTCTATCCAACTCCTCTCTTTCATTCGCTTATTTTCTTCTATTCCCCAAAATGCCCCTACTCTTTTCTTCAATTCCCACCCTAAGCCCTCTCTCAACCTCCGCGCTATTTCTCCCAAGCCCTACAACTCATCCAAGAGGTCTCGTCCATGGCTGCCGGTGGCCCTCGCCGTTAAGAACCTCGGTGACACGGACCGGGTCACGGTGTCTCCCGAGAACGGAGAAATTGCCGGAGATTTGCCATCTGCCGCCGGAGTTTACGCCGTTTACGGCAAGGACGGTGAGCTTCAGTTCATCGGTTTGTCACGGAACATTGCGGCGAGCGTTTCTAGTCATTGGAAATCGGTGCCGGAGCTATGTGGCTCCGTCAAGTTTGGGGTTGTGGATGAGCCTGATAGATCAACTTTAACTGAAGCATGGAAGTCTTGGATGGAAGAACACATAAAAGTCAGTGGAAAAGTTCCACCTGGTAACGAGTCAGGAAACGCCACTTGGGTCAGGCAGCAACCAAAGAAGAAGGCTGATCTTCGATTAACACCTGGTCGCCACATGCAATTAACTGTCCCACTTGAGGAGCTCATCGACAAGCTAGTAAAAGAGAACAAGGTAGTTGCTTTCATTAAAGGATCTAGAAGCGCACCAATGTGCGGATTCTCACAGAGGGTGATAGGCATTCTCGAGAATGTAGGAGTAGATTATGAGAGTGTAGATGTGCTGGATGAAAACTATAACTATGGACTGAGGGAGACACTGAAGCAGTACAGCAATTGGCCAACATTTCCTCAGATCTTTGTGAATGGTGAACTAGTTGGAGGGTGTGATATATTGACCTCTATGTATGAGAAAGGTGAACTTGCTACTTTGTTCAAAAAATAA 894 0.4754 MASTNLSSIQLLSFIRLFSSIPQNAPTLFFNSHPKPSLNLRAISPKPYNSSKRSRPWLPVALAVKNLGDTDRVTVSPENGEIAGDLPSAAGVYAVYGKDGELQFIGLSRNIAASVSSHWKSVPELCGSVKFGVVDEPDRSTLTEAWKSWMEEHIKVSGKVPPGNESGNATWVRQQPKKKADLRLTPGRHMQLTVPLEELIDKLVKENKVVAFIKGSRSAPMCGFSQRVIGILENVGVDYESVDVLDENYNYGLRETLKQYSNWPTFPQIFVNGELVGGCDILTSMYEKGELATLFKK* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2056 297 PANTHER GLUTAREDOXIN FAMILY MEMBER 18 297 IPR004480 -
Ahy12g2056 297 Gene3D Glutaredoxin 200 296 - -
Ahy12g2056 297 ProSiteProfiles Glutaredoxin domain profile. 197 297 - -
Ahy12g2056 297 TIGRFAM TIGR00365: monothiol glutaredoxin, Grx4 family 198 296 IPR004480 -
Ahy12g2056 297 CDD GIY-YIG_AtGrxS16 91 164 - -
Ahy12g2056 297 CDD GRX_PICOT_like 200 292 IPR033658 -
Ahy12g2056 297 PANTHER BIFUNCTIONAL MONOTHIOL GLUTAREDOXIN-S16, CHLOROPLASTIC 18 297 - -
Ahy12g2056 297 SUPERFAMILY Thioredoxin-like 196 296 IPR036249 -
Ahy12g2056 297 MobiDBLite consensus disorder prediction 157 178 - -
Ahy12g2056 297 Pfam Glutaredoxin 209 276 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2056 Ahy-Chr12 104808476 104810896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2056 198 297 Miscellaneous Gene Families AT4G15690 27.000 1.10e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2056 - - gmx:100792650 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2056 12 104808476 104810896 Ahy12g2056 12 104808476 104810896 ECH
Ahy12g2056 12 104808476 104810896 Ahy2g1781 2 90235165 90237710 hybridization