Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2039 ATGATGGCATGCCAAGAGTGGCCAGAACCAATAATAAGAGTCCAATCCTTAGCTGAAAGTGGCATAAATGCAATCCCTGAACGTTTCATCAAACCTCAATCCCAAAGGCCCAAAACACAATCCAATGTTGTCCCAACAAAACAAGGTTTTAATGATGTTGATGTTGATGTTGATGTTGAGAACATCAATATCCCGGTTATTGATTTTCAAGACCTGTATGGTGAAGACAAGAATCTAAAGGAACAAACACTTAAAAGGGTCTCTGAGGCTTGTAGGGAATGGGGTTTTTTCCAAGTGCTTAACCATGGTGTTAACCATGATTTGATGAAGAGTGCTAGAGAGGTTTGGCGTGAGTTCTTTCACCAACCAATTGAGGCTAAAGAAAAATATGCTAACTCACCACTTACCTATGAAGGCTATGGGAGTAGGTTGGGAATTAAAAAAGGTGCCATTTTGGATTGGAGTGACTACTTCTTTCTCCATTACATGCCTTCTTCTCTTAGGGACCAAGAAAAGTGGCCTTCTTTGCCAAACTCTTTAAGGGATGTGATTAATGAATATGGTGATGAAGTGGTTAAGCTAGGAGGAAGGGTTCTTGAATTGTTATCAATAAACCTTGGTTTGAAGGAGGATTTCTTGATGAATTCATTTGGTGGAGAGAGTGAGATTGGTGCATGCTTAAGGGTTAATTTCTACCCAAAATGCCCTCAACCAGACCTAACTCTTGGGCTCTCATCTCACTCAGACCCTGGGGGTATGACCATACTTTTACCAGATGAAAATGTTTCTGGTCTTCAAGTCCGCAGAGGAGAACATTGGATCACTGTCAAGCCTGTCCCAAATGCATTCATCATCAACATTGGTGACCAAATTCAGGTGCTAAGCAATGCAATGTACAAGAGTATAGAACATAGAGTAATTGTGAACTCAAACAAGGATAGAGTTTCATTGGCCTTCTTTTACAATCCAAGAAGTGATTTACTAATTCAACCTGCTAAGGAGCTTGTGAGTGAGGATAGGCCACCACTCTATCCACCAATGACATTTGATGAATATAGACTTTACATTAGGACCAAAGGACCATGTGGAAAATCTCAAGTTGAATCTTTGACTTCCCAAAAGTGA 1125 0.4036 MMACQEWPEPIIRVQSLAESGINAIPERFIKPQSQRPKTQSNVVPTKQGFNDVDVDVDVENINIPVIDFQDLYGEDKNLKEQTLKRVSEACREWGFFQVLNHGVNHDLMKSAREVWREFFHQPIEAKEKYANSPLTYEGYGSRLGIKKGAILDWSDYFFLHYMPSSLRDQEKWPSLPNSLRDVINEYGDEVVKLGGRVLELLSINLGLKEDFLMNSFGGESEIGACLRVNFYPKCPQPDLTLGLSSHSDPGGMTILLPDENVSGLQVRRGEHWITVKPVPNAFIINIGDQIQVLSNAMYKSIEHRVIVNSNKDRVSLAFFYNPRSDLLIQPAKELVSEDRPPLYPPMTFDEYRLYIRTKGPCGKSQVESLTSQK* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2039 374 Gene3D - 10 358 IPR027443 -
Ahy12g2039 374 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 222 323 IPR005123 -
Ahy12g2039 374 PRINTS Isopenicillin N synthase signature 87 104 - -
Ahy12g2039 374 PRINTS Isopenicillin N synthase signature 283 309 - -
Ahy12g2039 374 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 371 - -
Ahy12g2039 374 Pfam non-haem dioxygenase in morphine synthesis N-terminal 64 175 IPR026992 -
Ahy12g2039 374 Pfam 2OG-Fe(II) oxygenase superfamily 225 323 IPR044861 -
Ahy12g2039 374 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 8 371 - -
Ahy12g2039 374 SUPERFAMILY Clavaminate synthase-like 11 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2039 Ahy-Chr12 104236200 104241394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2039 14 370 Glycosyltransferase AT5G59530 33.516 2.20e-57 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2039 - - gmx:100809662 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2039 12 104236200 104241394 Ahy12g2039 12 104236200 104241394 ECH
Ahy12g2039 12 104236200 104241394 Ahy2g1765 2 89802529 89807751 hybridization