Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2030 ATGGGGGATTTCAACCTTGCTCTGTTGATCGTGGCGATCGTGGTGTGCGTGATCGTGTTCCTGGTGAACGTGTACCTTCTCGTGAACTACCAGCATCCTGATGACAAGAACCAGGCATACTTCCCCAAATTCGTCGTCGTTTTCGGTCTCTCTGTCGCCGCAATCTCCATTCTCATGCTCCCGGCAGATGTCGCGAACCGGCAGGCGTGTCGCCACGCGATCTACAATGGTGCGTGCAACCTCACGCTCCCGATGAAGACCTTGTGGCTCGTCGTGTACATCGTCGACGCCGTGCTTGTCTTCTTCGTTATTCCTTTCGCAATGTTCTACTATGAAGGCGACCAAGACAAGAGTATTGGCAAGAGGATTAGGAGTGCATTGTTGTGGATGGTGACCACTGCTATCGTGTGTGCTCTCATTCTGGGAATTTTGTACGGGCTTGTTGGGAAGGTGGACTTTACTGTCAGGCATCTCTCTTCTTCCACAACGTCATTTCCAAGTTCATGGAGCCTAAGTAACAGTCAACAATGCCTTGGAAATGGTGCCCGTCAGTGTTCTGCATATTTGGCTAATCCTTCATCAGAGAAAACGTGGACCATGCGTACTACCTTCCCTGAATATGTTGTTGCTCTTGCTACTATTGTTGGTTCTGTGCTTTTTGCTATATTTGGTGGTGTTGGCATTGCCTGTCTTCCATTAGGACTTATATTTTCATTTATTCGGCGCCCAAAGGCTGTTATCACTCGTTCACAATATATCAAGGAAGCAACTGAGCTGGGCAAGAAAGCAAGAGAACTGAAGAAAGCAGCTGAGTCACTTCATCAAGAAGAAAGAAGTGGTGCAAAGGGTAGGAAATTTCGCAAAAATGTGAAGTCAGTAGAAAAGGAATTGTTTCAACTAGAAGAAGATGTAAAGCTTCTTGAGGAGATGTACCCACAAGGCGAACAGGCTGAGACAACATGGGCACTAACAGTTCTTGGATATCTGGGAAAGCTTGTTTTGGGAATTTTAGGGCTTATTGTTTCTGTGGCATGGGTTGCACATATCATCATCTATCTATTAATCGATCCTCCTCTATCTTCTTTCCTGAATGAAGTTTTCATCAAGCTGGATAGTATATGGGGTCTTCTGGGAACAGCCGCGTTTGCATTTTTCTGCTTCTACCTTTTGCTTGCTGTTATTGCTGGTGCAACAATGCTAGGGCTGAGACTAGTTTTCATTACTATACATCCTATGAAATGGGGAGCAACTCTCATGAACTCTTTTCTGTTTAATGTGGGCCTTATCCTTCTCTGCTCCATCAGTGTGATCCAGTTCTGTGCGACAGCATTTGCCTACTATGCCCAAGCAACTGCAGCACAGGAAATATTTGGCCACACCTTGGAGTCTCTGCGTGGAATTAAATATTTGTACAAGTACAACGTATTTCAGATCGCATTTGTTGTGTTGGCTGGATTGACATTTGTGTATTATCTTATCTTTGGATGGAGAAGAAGAAAGCCTAGTGGCAGGTTCCAATTGTCTTCATGA 1530 0.4516 MGDFNLALLIVAIVVCVIVFLVNVYLLVNYQHPDDKNQAYFPKFVVVFGLSVAAISILMLPADVANRQACRHAIYNGACNLTLPMKTLWLVVYIVDAVLVFFVIPFAMFYYEGDQDKSIGKRIRSALLWMVTTAIVCALILGILYGLVGKVDFTVRHLSSSTTSFPSSWSLSNSQQCLGNGARQCSAYLANPSSEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIRRPKAVITRSQYIKEATELGKKARELKKAAESLHQEERSGAKGRKFRKNVKSVEKELFQLEEDVKLLEEMYPQGEQAETTWALTVLGYLGKLVLGILGLIVSVAWVAHIIIYLLIDPPLSSFLNEVFIKLDSIWGLLGTAAFAFFCFYLLLAVIAGATMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCATAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIAFVVLAGLTFVYYLIFGWRRRKPSGRFQLSS* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2030 509 Coils Coil 256 276 - -
Ahy12g2030 509 PANTHER BNAC05G43630D PROTEIN 1 509 - -
Ahy12g2030 509 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 509 - -
Ahy12g2030 509 Coils Coil 290 310 - -
Ahy12g2030 509 Pfam LMBR1-like membrane protein 271 487 IPR006876 -
Ahy12g2030 509 Pfam LMBR1-like membrane protein 9 278 IPR006876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2030 Ahy-Chr12 104048674 104054424 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2030 K14617 - gmx:100816750 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2030 12 104048674 104054424 Ahy2g1758 2 89704153 89709902 hybridization