Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2002 ATGGTGTTATCCTCAGCCATGGCTTCACTGCTTCTAGCTTCACCTCCACCACTCTCCACTCAACTCCACACTTCTTCCTCTTCTCACCTTTCTTTCTCTCACTCCCAAACCCTCTCCTCTTCACCACTCTTCACTTCTTCTGTTTCCGTTTCACACTCCGCCACAACTTCCTCTTCTCCTTCTCCAATCCCTTCTGTTTACTGTGGCAGAGGTGACAAGAAAACTGCAAAGGGAAAGCGCTTCAACCATTCATTCGGAAATGCAAGGCCAAGGGACAAGAAAAAGGGTAGAGGACCACCGAGGCTTTTTGCTCCGCCGGCACCTACGAAGAAGGATCGTTTCGAAGATAATGAAGTGGTGAAGATTGAAATTGATGAGTCTCTCTTTACTAGCTGA 396 0.4773 MVLSSAMASLLLASPPPLSTQLHTSSSSHLSFSHSQTLSSSPLFTSSVSVSHSATTSSSPSPIPSVYCGRGDKKTAKGKRFNHSFGNARPRDKKKGRGPPRLFAPPAPTKKDRFEDNEVVKIEIDESLFTS* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2002 131 TIGRFAM ribo_THX: ribosomal small subunit protein bTHX 69 93 IPR030826 GO:0005840
Ahy12g2002 131 MobiDBLite consensus disorder prediction 15 113 - -
Ahy12g2002 131 PANTHER 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC 7 129 IPR044695 -
Ahy12g2002 131 Pfam Ribosomal protein S31e 7 112 IPR030826 GO:0005840
Ahy12g2002 131 MobiDBLite consensus disorder prediction 72 99 - -
Ahy12g2002 131 PANTHER 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC 7 129 - -
Ahy12g2002 131 MobiDBLite consensus disorder prediction 15 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2002 Ahy-Chr12 103353573 103354610 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2002 K19033 - vvi:100258002 135.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2002 12 103353573 103354610 Ahy2g1730 2 89013078 89014002 hybridization