Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1962 ATGAATCCCACAGCACTATCATCACACCAACCACCACCGCCACCACCGCCATTGCAGCAGCAGCAACAACAACCACAACCTCTTCGCACCTGCCCCCGCCACCCTCAAGAAAAATTCACGGGCTTCTGCCCTGAATGCCTCTGTGAACGCCTCGCCGAACTCAACCCAAACAACACCAACTCCAACACTCCTCTCCCCCGCAAGCCACCTACTTCCTCCACCGCTGCCGCCGCACTTAGAGCAATCTTCCGTCCTTCCTCCACTGCCTCCGCAAAAGACAACACCACCAGCAGCAGGCCGCCTACCTCTTCTTTCTTGCCGGAGCTCCGTCGAACGAAATCGTTTTCGGCTTCCAAGAACGAAGCCTTATCCGGCGCGTTCGAGCCGCAGAGAAGATCCTGCGACGTTAGGGCTCGAAATAGCACACTCTGGAATCTCTTCACGCAAGAGGCGGAGAAGAAATCACAGCAGAACAAGGAAGCTTCAGAAGCTGAAGCAACAAATCAGGTATCAGTAGTTGAAACAAAGGAAGAAGAAGAAGAAGAGGAGGAGGAGGTAAAAGAAGTTGAACTAGTAGTTGAAGAAGAAGAAAATCTCGAGCGAAACGACGTGGTTGAGGAAGAAGACGACGAAATTAGGGCTCTTGAGGAACCCAATGTGAATGTGATTGAAGAAGGAGTTGGGGAAATTGTTGTTGAAGAAGAAGAGCAAGAGTTGAAGGCAATGAAGGACCACATAGATCTCGATTCTTCCAATTCACAGCCAAAGAAGGATTCCAAGATCGCCGGTAGTCTCTGGTCAGCGGCTTCGGTGTTCAGCAAGAAGCTGCAGAAATGGAGGCAGAAACAGAAGATGAAGAAGCGTCGAAACGGCGTCGTTGACGGCGGTTCCGGCGACTGTGGACCCGCCGCACTTCCGGTGGAGAAGCCAATCGGACGGCAGTTCAGGGACACACAATCGGAGATCGCTGACTACGGCTTCGGCCGACGGTCCTGCGATACCGATCCAAGATTCTCCCTGGATGCGGGCCGGATGTCGTTAGACGCCGGCCGGATGTCATTCGACGATCCAAGGTACTCGTTCGACGAGCCGCGGGCTTCGTGGGATGGGTACCTTCTCGGAAGGACGGCCTTTCCGAGGGCAATGCCGACCATGCTGTCGGTGGTGGAGGATTCACCGGCGGCCGTAATTCCACCGGTGCATCCTCTGAGGACTGATACTCAAATTCCTGTTGAGGAACCGTTGAATTCGGTTAATGGGGATGATACTGTTCCCGGTGGAACTGCACAGACCAGAGAGTATTACTCTGATTCATCCTCTAGGAGGAGGAAGAGCTTTGAGAGGTCCAATTCGATGAGAAGATCATCGGTTTCTTCGCTTGTTGGGGAAATGGATGAGCTGAAATGTGGCAGCATTGCCAATAATTCTAATCCTAATGTCAATGGAAATGCTAAGGTCACCCCTGCTGGTGTTGATTATGTCAATGGCCCCAAATTGGCCTTCCTTGATAGGGATTTGAGCTCGAATTCGGCGAGGGATGATTGCTGTTCTGAGAGCTTTGATATTGGATTTGCGGATACTGCTTCTGTTGTAGGGAACGGCGACCGGAAGGAGCAGAAAAAGTCGCGCCGGTGGGGTAAAGGGTGGAGCATTTGGGGTCTTATTCACCGGAAAGGTGGTAATGGTGGTGGGAACAAGGATGATGATGATGATAGGTATAGTAGGGCTAATGGGGTGGAGCGATCGTACTCAGAATCATGGCAGGACCTAAGAGGGGTTCAGAATGGAGATCCAAGAAGTGCCTTCAGTGGCAGGATATTTAGGAGCAATAGCAGTGTGAGTTGGAGGAATGCACAAAGCATAGGTGGTGGATCGTTTGGCTCTGTGAGAAGGAATGGTGTTGTTCAAGGTAATGGTAATGGAAAGAAGGGTAAAGATGAATTTGTGTTGGAAAGGAATAGAAGTGCAAGGTATTCTCCTAACCATGCTGACAACAATGGCCTTTTGAGGTTCTACTTGACCCCCATGAGAGGTAGCAGAAGAAATGGGTCTGTGAAAAGTAGATCAAGCCAGGCACATTCAATTGCTAGAAGCGTTCTTCGATTGTATTGA 2112 0.5085 MNPTALSSHQPPPPPPPLQQQQQQPQPLRTCPRHPQEKFTGFCPECLCERLAELNPNNTNSNTPLPRKPPTSSTAAAALRAIFRPSSTASAKDNTTSSRPPTSSFLPELRRTKSFSASKNEALSGAFEPQRRSCDVRARNSTLWNLFTQEAEKKSQQNKEASEAEATNQVSVVETKEEEEEEEEEVKEVELVVEEEENLERNDVVEEEDDEIRALEEPNVNVIEEGVGEIVVEEEEQELKAMKDHIDLDSSNSQPKKDSKIAGSLWSAASVFSKKLQKWRQKQKMKKRRNGVVDGGSGDCGPAALPVEKPIGRQFRDTQSEIADYGFGRRSCDTDPRFSLDAGRMSLDAGRMSFDDPRYSFDEPRASWDGYLLGRTAFPRAMPTMLSVVEDSPAAVIPPVHPLRTDTQIPVEEPLNSVNGDDTVPGGTAQTREYYSDSSSRRRKSFERSNSMRRSSVSSLVGEMDELKCGSIANNSNPNVNGNAKVTPAGVDYVNGPKLAFLDRDLSSNSARDDCCSESFDIGFADTASVVGNGDRKEQKKSRRWGKGWSIWGLIHRKGGNGGGNKDDDDDRYSRANGVERSYSESWQDLRGVQNGDPRSAFSGRIFRSNSSVSWRNAQSIGGGSFGSVRRNGVVQGNGNGKKGKDEFVLERNRSARYSPNHADNNGLLRFYLTPMRGSRRNGSVKSRSSQAHSIARSVLRLY* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1962 703 MobiDBLite consensus disorder prediction 1 35 - -
Ahy12g1962 703 PANTHER PROTEIN: UPF0503-LIKE PROTEIN, PUTATIVE (DUF740)-RELATED 1 703 - -
Ahy12g1962 703 MobiDBLite consensus disorder prediction 154 189 - -
Ahy12g1962 703 MobiDBLite consensus disorder prediction 54 111 - -
Ahy12g1962 703 MobiDBLite consensus disorder prediction 87 111 - -
Ahy12g1962 703 MobiDBLite consensus disorder prediction 285 307 - -
Ahy12g1962 703 MobiDBLite consensus disorder prediction 54 70 - -
Ahy12g1962 703 MobiDBLite consensus disorder prediction 175 189 - -
Ahy12g1962 703 MobiDBLite consensus disorder prediction 410 459 - -
Ahy12g1962 703 Pfam Protein of unknown function (DUF740) 20 681 IPR008004 -
Ahy12g1962 703 Coils Coil 163 202 - -
Ahy12g1962 703 MobiDBLite consensus disorder prediction 626 645 - -
Ahy12g1962 703 MobiDBLite consensus disorder prediction 421 435 - -
Ahy12g1962 703 PANTHER PROTEIN: UPF0503-LIKE PROTEIN, PUTATIVE (DUF740)-RELATED 1 703 IPR008004 -
Ahy12g1962 703 MobiDBLite consensus disorder prediction 1 22 - -
Ahy12g1962 703 MobiDBLite consensus disorder prediction 436 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1962 Ahy-Chr12 101796492 101800207 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1962 - - tcc:18597599 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1962 12 101796492 101800207 Ahy12g1962 12 101796492 101800207 ECH
Ahy14g1801 14 102159214 102162080 Ahy12g1962 12 101796492 101800207 PCT
Ahy4g1599 4 91615172 91618053 Ahy12g1962 12 101796492 101800207 PCT