Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1961 ATGAACCCCTCATTGACGAAGAAGCCTTTTGTGCTGCTCTGCATCGTTCTCTGCACGTTCTTCACTTTCGTCCTCTCTGAGGATTCTGAGAAGAATGCCTTTCGGGAGCGCGAAGCCTCCGAAGACACTCTCGGATACCCCGAAATAGATGAGGATGCGTTGGTGAATTCGAAATGCCCTAAGAATTTGGAGCTGAGATGGCAAACGGAAGTTAGTTCTAGTATATATGCGACCCCATTGATTTCTGATATTAACAGCGATGGGAAGCTTGAGATTGTGGTTCCATCCTTTGTACACTACCTTGAAGTTCTGGAAGGTTCAGATGGTGACAAAATGCCAGGCTGGCCTGCTTTCCACCAATCAACTGTGCATTCTAGTCCTCTACTATATGACATTGACAAAGATGGGGTGAGAGAAATAGCTTTGGCAACCTACAATGGTGAAGTGCTGTTTTTCAGGGTTTCTGGCTATATGATGTCAGATAAGCTGGTGGTCCCACGTAGGAAAGTGGCAAAAAATTGGTATGTGGGTTTGAACGCTGACCCAGTTGATCGATCTCATCCAGATGTTCATGATGATCAACTTGCTGAAGAAGCCACTATATTTAATTCTATGGCTCAAACTAATGGGAGGCACAAAGTCAACTCTTCAGCTGCCACATCAACGGAAAACCACCATGAAACACCCAGTGTGTCTAATCCAGAGCATGTAAAGCAAACAAATGGAACTCAAGTAGAAGAGAATAGTAAGATGCCAAAAACAGCTGGTAATTCCTCTGGGAATGCTGGTGTTCAGATGCCGGCAAATGCTGATAATTCATCTGTGAATGCTGGTATTCAGATGCCATCAAATGCTGATAATTCCTCTGCGAATGCTGGTATTCAGATACCAGCAAATGCTGATAATTCCTCTGTGAATGCTGGTATTAAGATGCCAGGAAATGCTGATAATTCCTCCATGGGTGCTGGGTCAGTGGAAGCTGCTAAAACAGATAACCAAACTAGCACAAAGAGACGCCTGCTGGAGGTTAATTCCAAAGGAGAAGAGCTAGGTGGCTCTGAATCCAAAGAGGGTAATGAGGGTAACCATGCTGCAACTGTCGAGAATGATGAAGGCCTGGAAGCAGATGCTGATTCATCTTTTGAGCTATTTCGCAACAGCGATGAACTGGCTGATGAATATAACTATGATTATGATGATTATGTTGATGAATCAATGTGGGGTGACGAAGAATGGACTGAAGTTAATCATGAGAAATTAGAGGATTATGTGAATGTTGACTCACATATCTTGTGCACTCCTGTCATTGCTGATATTGACAATGATGGTGTATCGGAAATGATTGTTGCTGTTTCTTATTTCTTTGATCACGAGTATTATGACAACCAGGAGCACTTGAAAGAACTGGGTGATATTGACATTGGGAAATATGTTGCGGGTGGTATTGTTGTTTTTAATCTGGATACAAAACAAGTTAAGTGGACTGCAGAACTCGATCTTAGTACTGATACTTCAAACTTCCGAGCATACATATATTCTTCTCCAACTGTTGTAGATTTAGATGGTGATGGAAATCTGGACATTCTTGTTGGGACTTCTTATGGACTATTCTATGTGCTGGATCATCATGGTAAGATTAGAGAGAAGTTCCCTCTTGAAATGGCCGAGATTCAAGGGGCTGTTGTTGCAGCTGACATTAATGATGATGGGAAAATTGAGCTAGTTACTGCTGATATACATGGAAATGTCGCTGTATGGACTCCAAAAGGTAGTTTGATATGGGAAAAACATCTGAAGAGTCTTATTCCACAGGGCCCAACTATAGGTGATGTCGATGGGGATGGCCATACTGAGCTTGTTGTGGCAACACTATCTGGGAAGATTCATGTTCTTGATGGCAAGGATGGGGGATCTATTGGGAGGTATCCATATCAAACACATGGGAGAGTGATGAATCAAGTTCTTCTAATTGATTTAAGTAAACCCAAGGAGAAAAAGAAGGGATTGACTATTGTTACTACATCATTTGATGGTTATTTGTACCTCATTGATGGGCCTACTGGCTGTGCTGATGTTGTTGATATTGGTGAAACCTCATATAGCATGGTCTTGGCAGACAATGTAGATGGTGGGGATGACCTTGATTTAATTGTTACAACAATGAACGGCAATGTCTTTTGCTTCTCAACTCCATCGCCTCATCATCCTCTCAAGGCTTGGAGGTTGCCTCATCAAGGAAGAAATAATGTTGCAACTCGGTATGGTCGTCAAGGTATCTATGTTACTCATCCTTCTAGAGCATTTCGCGATGAAGAAGGCAAGAACTTTTGGGTGGAAATTGAGATTGTAGATAATTACAGATACCCATCTGGGCATCAAGGACCCTACAATGTCACTGTATCGTTACTAGTTCCCGGTAATTACCAAGGTGAGCGAACGATAAAGCAGAATCAGATATATGCTCAACCCGGTAAATATCGGATTAAGCTTCCAACTGTGGCAGTAAGGACCACAGGAATGGTATTGGTTGAGATGGTTGACAGGAATGGAATATATTTCTCTGATGATTTCTCGCTCACATTCCATATGCACTACTATAAACTGTTGAAGTGGCTTCTTGTCTTCCCTATGCTTGGGATGTTTGGGGTTCTCGTCATCCTTCGGCCACAAGGCTCAGTGCCATTGCCATCATTTTCAAGGAATATTGATTAG 2712 0.4237 MNPSLTKKPFVLLCIVLCTFFTFVLSEDSEKNAFREREASEDTLGYPEIDEDALVNSKCPKNLELRWQTEVSSSIYATPLISDINSDGKLEIVVPSFVHYLEVLEGSDGDKMPGWPAFHQSTVHSSPLLYDIDKDGVREIALATYNGEVLFFRVSGYMMSDKLVVPRRKVAKNWYVGLNADPVDRSHPDVHDDQLAEEATIFNSMAQTNGRHKVNSSAATSTENHHETPSVSNPEHVKQTNGTQVEENSKMPKTAGNSSGNAGVQMPANADNSSVNAGIQMPSNADNSSANAGIQIPANADNSSVNAGIKMPGNADNSSMGAGSVEAAKTDNQTSTKRRLLEVNSKGEELGGSESKEGNEGNHAATVENDEGLEADADSSFELFRNSDELADEYNYDYDDYVDESMWGDEEWTEVNHEKLEDYVNVDSHILCTPVIADIDNDGVSEMIVAVSYFFDHEYYDNQEHLKELGDIDIGKYVAGGIVVFNLDTKQVKWTAELDLSTDTSNFRAYIYSSPTVVDLDGDGNLDILVGTSYGLFYVLDHHGKIREKFPLEMAEIQGAVVAADINDDGKIELVTADIHGNVAVWTPKGSLIWEKHLKSLIPQGPTIGDVDGDGHTELVVATLSGKIHVLDGKDGGSIGRYPYQTHGRVMNQVLLIDLSKPKEKKKGLTIVTTSFDGYLYLIDGPTGCADVVDIGETSYSMVLADNVDGGDDLDLIVTTMNGNVFCFSTPSPHHPLKAWRLPHQGRNNVATRYGRQGIYVTHPSRAFRDEEGKNFWVEIEIVDNYRYPSGHQGPYNVTVSLLVPGNYQGERTIKQNQIYAQPGKYRIKLPTVAVRTTGMVLVEMVDRNGIYFSDDFSLTFHMHYYKLLKWLLVFPMLGMFGVLVILRPQGSVPLPSFSRNID* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1961 903 PANTHER PROTEIN DEFECTIVE IN EXINE FORMATION 1 10 902 - -
Ahy12g1961 903 SUPERFAMILY Integrin alpha N-terminal domain 67 652 IPR028994 -
Ahy12g1961 903 Gene3D - 355 736 IPR015943 GO:0005515
Ahy12g1961 903 PANTHER - 10 902 IPR045232 -
Ahy12g1961 903 MobiDBLite consensus disorder prediction 332 369 - -
Ahy12g1961 903 MobiDBLite consensus disorder prediction 205 331 - -
Ahy12g1961 903 MobiDBLite consensus disorder prediction 205 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1961 Ahy-Chr12 101736631 101743163 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1961 - - gmx:100805038 1472.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1961 12 101736631 101743163 Ahy12g1961 12 101736631 101743163 ECH