Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1933 ATGGCGAACAAGCTCTGCAATCAGGATATTTTGGAGCAGCTGAGAAATGGTACAGCAAAATTTGAGCTTGTATCTTCGCCACTTCCTTCACTTGCTGCTGCTGCTGCTCCTAAATCCAGTAACATCACAAGCTTATTTGGAATCGGAAATTGTAGCACTAGCACTCTTTTTTTCGCTAGAATTTCCTCATCACTTGGTGGACAGTCTCCAGCTATGAAGAAGCTAGAGCAGTTTTCGGTTCAGAAGGTCACAGGGGATGGAAGGTGTATGTTTCGTGCACTGGTCAAAGGAATGGCTTACAATAAGGGAGTCTCTCTTAACCAACGCAAAGAGAGAGAAGATGCAGATGAACTAAGAATGGCTGTGAAAGAAGTTATATGTGATAATAATGGAGAACGTAAATTATATGAAGAAGCTCTCATTGCCATCACAGTTGATGAGTCTCTACCACGTTACTGCCAACGAATTGCGCGATCTGATTTTTGGGGAGGAGAGTCGGAGCTGCTGGTACTGTCAAAGTTATGTAAGCAGCCAATTATTGTTTACATACCAGAGCATGAGCATAGAGGGAGTGGTTGGGGATCTGGTTTCATTCCCATTGCGGAGTATGGAAGTGAGTTCATAAAGGGTGCTAGAAACAGGAATCCCAAGAAACCTGTGAGGCTATTGTACAGTGGTAAGAACCATTATGATCTTTTGCTATGA 705 0.4312 MANKLCNQDILEQLRNGTAKFELVSSPLPSLAAAAAPKSSNITSLFGIGNCSTSTLFFARISSSLGGQSPAMKKLEQFSVQKVTGDGRCMFRALVKGMAYNKGVSLNQRKEREDADELRMAVKEVICDNNGERKLYEEALIAITVDESLPRYCQRIARSDFWGGESELLVLSKLCKQPIIVYIPEHEHRGSGWGSGFIPIAEYGSEFIKGARNRNPKKPVRLLYSGKNHYDLLL* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1933 234 SUPERFAMILY Cysteine proteinases 77 233 IPR038765 -
Ahy12g1933 234 ProSiteProfiles OTU domain profile. 78 234 IPR003323 -
Ahy12g1933 234 Gene3D - 53 234 - -
Ahy12g1933 234 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 3 233 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
Ahy12g1933 234 Pfam OTU-like cysteine protease 84 185 IPR003323 -
Ahy12g1933 234 PANTHER OTU-LIKE CYSTEINE PROTEASE FAMILY PROTEIN, EXPRESSED 3 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1933 Ahy-Chr12 101022637 101027565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1933 - - gmx:100807522 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1933 12 101022637 101027565 Ahy12g1933 12 101022637 101027565 ECH