Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1929 ATGATGGATGGTGCGAGCAACGGTGGCATGTTGTACCATGAGGTACAAGAGTCCAAGCTTTGCGCTGTGCATTGCGTCAACACGGTGCTGCAGGGTCCGTTCTTCTCCGAGTTTGATCTCGCTGCTCTCGCCTCCGATCTCGATCGCAGGGAGCGACAGATGATGCTCCCGGCCGCACTCTCCTCCGGCGATTTTCTTTCTGAGGAGTCGCACAATGTCTCCCTCGATGGAGATTTCAGCATCCAGGTCTTACAAAAGGCTTTGGAAGTGTGGGATCTACAGGTTATCCCTCTTGACTCACCTGTTGCTGAGCCTGCTCAAATTGATCCTGAACTGGAAAACGCCTTTATTTGCCATTTGCAAGACCATTGGTTTTGTATCCGTAAAGTGAATGGAGAGTGGTATAATTTTGACAGTCTTTATGCAGCCCCACAACACCTTTCTAAGTTTTACCTCTCAGCCTATCTTGATTCTTTGAAAGGCTTTGGGTGGAGCATATTCCTAGTAAGAGGAAATTTTCCAAAAGAGTTTCCCATATCCTCAGCCGAATCTTCTAATGGTTTTGGGCAGTGGCTGTCACCTGAAGATGCTGAGAGAATAACTAAGTCTTGCAATTCAGGGCTGACTCCACATCAGAGAACTAATGAGAGCCAACAACATTACAATCAATTTCTTTCATCCGGGGAGGTGGAAATGTATTCAGACTTTGAAGATGAGGATCTGAAGGCTGCAATAGCTGCTAGTCTAATGGATTCCTCCTCATCTGTGGCGAATGTCAAAGTCGAGGCAAGCACTCCCCAAAATGATAATCAAAGTAGTAAACAAGTTGCAACCACTGAAGATTTCCCACAAAACAACAAACAAAAGGAAGTTGTTGAAGCTAGTCAACCTGCCAACAACCAAAGTACCAAACTGGTGGAAGCTACTGAAGATGATTCTCTTCAAAAAGATCAAAGTAGCCAAGAAGTGACATCTATTGTAGGTCATAATACTCAAGATGAGAACCATAATGACAAAGGAAAAGCAGTCTTGTAA 1035 0.4473 MMDGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRRERQMMLPAALSSGDFLSEESHNVSLDGDFSIQVLQKALEVWDLQVIPLDSPVAEPAQIDPELENAFICHLQDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFLVRGNFPKEFPISSAESSNGFGQWLSPEDAERITKSCNSGLTPHQRTNESQQHYNQFLSSGEVEMYSDFEDEDLKAAIAASLMDSSSSVANVKVEASTPQNDNQSSKQVATTEDFPQNNKQKEVVEASQPANNQSTKLVEATEDDSLQKDQSSQEVTSIVGHNTQDENHNDKGKAVL* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1929 344 Gene3D - 20 174 - -
Ahy12g1929 344 MobiDBLite consensus disorder prediction 260 344 - -
Ahy12g1929 344 SMART Josephin_2 15 172 IPR006155 GO:0004843|GO:0016579
Ahy12g1929 344 ProSiteProfiles Josephin domain profile. 8 184 IPR006155 GO:0004843|GO:0016579
Ahy12g1929 344 Pfam Josephin 16 170 IPR006155 GO:0004843|GO:0016579
Ahy12g1929 344 MobiDBLite consensus disorder prediction 260 308 - -
Ahy12g1929 344 PRINTS Josephin signature 12 35 - -
Ahy12g1929 344 PRINTS Josephin signature 70 89 - -
Ahy12g1929 344 PRINTS Josephin signature 110 129 - -
Ahy12g1929 344 PRINTS Josephin signature 131 151 - -
Ahy12g1929 344 PRINTS Josephin signature 155 174 - -
Ahy12g1929 344 PANTHER ATAXIN-3-RELATED 2 323 IPR033865 GO:0004843|GO:0016579
Ahy12g1929 344 PANTHER ATAXIN-3 2 323 - -
Ahy12g1929 344 Gene3D - 34 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1929 Ahy-Chr12 100972766 100976080 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1929 K11863 - gmx:100776098 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1929 12 100972766 100976080 Ahy12g1929 12 100972766 100976080 ECH