Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1871 ATGGTGAAAGATAGGAAAATTGGTGTGGCTATGGACTTTTCCAATAGCAGCAAGAATGCTCTAAGTTGGGCACTTGAGAATTTGGCTGATAAAGGTGACACCTTTTATATAATCCACATTAACCCTAATGATCTTGATGAATCTCGCACCAAGCTTTGGGCCAAATCTGGTTCTCCTCTTATTCCTTTGAAAGAGTTTAGAGAGCCAGAGGTTATGAAAAAGTATGGTGTCCAAATTGATATTGAGGTTCTTGATTTGCTTGACACTGCTTCCAGACAAAAAGAGGTGAACATTGTTACAAAGTTGTACTATGGTGATGCCAGAGAGAAACTTTTGGATGCTGTTGAAGATCTGAAGCTGGATTCTATTGTTATGGGAAGCAGGGGTCTCAGCACAATCAAAAGGATCATATTGGGAAGTGTCAGCAACTTTGTAGCAACCCATGCTCCTTGCCCTGTAACAATTGTCAAGGAATCTAACAGCACCAGCAAGTGA 495 0.4081 MVKDRKIGVAMDFSNSSKNALSWALENLADKGDTFYIIHINPNDLDESRTKLWAKSGSPLIPLKEFREPEVMKKYGVQIDIEVLDLLDTASRQKEVNIVTKLYYGDAREKLLDAVEDLKLDSIVMGSRGLSTIKRIILGSVSNFVATHAPCPVTIVKESNSTSK* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1871 164 Gene3D HUPs 1 164 IPR014729 -
Ahy12g1871 164 PRINTS Universal stress protein signature 135 157 IPR006015 -
Ahy12g1871 164 PRINTS Universal stress protein signature 117 129 IPR006015 -
Ahy12g1871 164 PRINTS Universal stress protein signature 4 22 IPR006015 -
Ahy12g1871 164 PANTHER IMP2'P 4 162 - -
Ahy12g1871 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 158 - -
Ahy12g1871 164 CDD USP_Like 6 156 - -
Ahy12g1871 164 Pfam Universal stress protein family 5 157 IPR006016 -
Ahy12g1871 164 PANTHER OS05G0453700 PROTEIN 4 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1871 Ahy-Chr12 99473468 99475295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g1871 3 156 Receptor kinase-like Gene Family AT5G35380 25.157 6.35e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1871 - - gmx:100499951 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1871 12 99473468 99475295 Ahy12g1871 12 99473468 99475295 ECH
Ahy12g1871 12 99473468 99475295 Ahy2g1620 2 85766132 85768282 hybridization