Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1799 ATGGCAAAAGAAGGACCTAACTGGGATGGATTACTCAAATGGAGCATTGCTAACTCCGATGGAACTCGCCCCACTCGCAATTTAAGTGAAGAGGATCGGAGATGGTTTATGGAAGCGATGCAAGCACAGACCATTGATGTTGTAAAACGTATGAAAGAGATTACCCTTGTAATGCAGACTCCAGAGCAAGTCTTGGAATCTCAGGGTGTTACCCCTGCAGACATTGAAGATTTGTTAGATGAGTTGCAAGAGCATGTTGAGTCGATTGATATGGCCAATGATCTCCATTCAATTGGTGGGTTGGTTCCGCTTCTTGGTTACCTCAAGAACTCCCATCCCAATATTCGTGCAAAGGCTGCTGATGTTGTAACCACAATAGTCCAGAATAATCCTCGTAGTCAGCAACTTGTTATGGAAGCAAATGGCTTTGAACCTCTTATTTCCAATTTCACTTCAGATCCTGATGTGAATGTTAGGACTCAGGCACTTGGAGCAATCTCTTCACTGATTCGGCACAACAAATCTGGCATAGCTGCCTTTCGTCTTGCAAATGGTTATGCAGCCTTAAAAGATGCTCTAACTTCTGAAAATGTGAGGTTTCAAAGGAAGGCTCTCAACTTGATCCATTACCTTTTGAATGAGAATACTTCAGATTGCAGCATTGCAAATGAGCTAGGATTTCCACGGATACTGATGCACCTTGCCTCTAGTGAAGATTCAGATGTCCGAGAAGCGGCCCTCCGCGGACTTCTTGAGCTTACTCGTGACAAAAAAGAAGTTAAAAATGAAGCTTCCACAGAAGACGATGAGAAAATGAAGCAACTTCTTCAAGAACGAATAAATGGAATCAGTTTAATGTCAGCTGAAGACCTTGGGGCGGCCAGGGAGGAGAGGCAGCTTGTGGACTCCCTCTGGAGCACTTGCTTCAACGAGCCGTCATCTCTTCGAGAAAAGGGTCTTCTAGTTTTGCCTGGAGAAGATAATGCAGCTGCCCCTCCTGATGTCGCCAGCAAATTTTTCGAGCCACCCCTTCGATCTTCGTCCGCAAACCCCAATTCCAAGAGAGAATCCAAAAGTGAAAAGAAGGAGGCTCCTTTGCTTATAGGGCCAGGGCCGCCTCCTCGGAACAGCGACAATCAAGGTAGTTAG 1149 0.4552 MAKEGPNWDGLLKWSIANSDGTRPTRNLSEEDRRWFMEAMQAQTIDVVKRMKEITLVMQTPEQVLESQGVTPADIEDLLDELQEHVESIDMANDLHSIGGLVPLLGYLKNSHPNIRAKAADVVTTIVQNNPRSQQLVMEANGFEPLISNFTSDPDVNVRTQALGAISSLIRHNKSGIAAFRLANGYAALKDALTSENVRFQRKALNLIHYLLNENTSDCSIANELGFPRILMHLASSEDSDVREAALRGLLELTRDKKEVKNEASTEDDEKMKQLLQERINGISLMSAEDLGAAREERQLVDSLWSTCFNEPSSLREKGLLVLPGEDNAAAPPDVASKFFEPPLRSSSANPNSKRESKSEKKEAPLLIGPGPPPRNSDNQGS* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1799 382 PANTHER BNAC03G36030D PROTEIN 1 342 - -
Ahy12g1799 382 Coils Coil 75 95 - -
Ahy12g1799 382 Coils Coil 243 270 - -
Ahy12g1799 382 SMART arm_5 173 213 IPR000225 GO:0005515
Ahy12g1799 382 SMART arm_5 215 255 IPR000225 GO:0005515
Ahy12g1799 382 SMART arm_5 85 128 IPR000225 GO:0005515
Ahy12g1799 382 SMART arm_5 129 171 IPR000225 GO:0005515
Ahy12g1799 382 Gene3D - 43 316 IPR011989 -
Ahy12g1799 382 SMART TOG_3 46 289 IPR034085 -
Ahy12g1799 382 MobiDBLite consensus disorder prediction 331 382 - -
Ahy12g1799 382 PANTHER PROTEIN FOLDING REGULATOR 1 342 - -
Ahy12g1799 382 Pfam Nucleotide exchange factor Fes1 10 95 IPR013918 -
Ahy12g1799 382 SUPERFAMILY ARM repeat 50 267 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1799 Ahy-Chr12 96776032 96780161 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1799 K09562 - gmx:100803376 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1799 12 96776032 96780161 Ahy12g1799 12 96776032 96780161 ECH
Ahy12g1799 12 96776032 96780161 Ahy2g1547 2 82860583 82864590 hybridization