Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1796 ATGGCAACAGCTTCTGCTCACAAGTCTCTCACAAAATGCACAAACACCTTCCTCTTATTTCCTCTCTCCAAGAAGCAACACTCTATTTACACTCTTCATTTTCACCAAAGACCATTGTGCCATGGATGCTATCTTTCAATGAATGGCTGCAGAAAAGGACAGTCAAGAGGGCCTGTTGGGACAATAGAGACACAAACGTTGGAACCGGTTGCAACAACTTCAATGGCTTTGTACAGCCTGAAAATGACGATTTCTAAGATGAAATCAGAGCCTCCATATCGGAGCTCTTCGGGCATAGTGAGGCTGCAGGTCCCCATTGAGGAGGAAGAGGTTGAGGCCATTGATTGGCTCCACTCACAGAACCACCTGCTCCTTCCTCGCTGCTTCTTCTCCGGCAGGGAACACAATTCTTTTGACTCTAATGGCAGAAGCTTGGTTAGCGTTGCCGGTGTTGGCTCTGCCGTTTCTTTTTGCCAGCCACACCCCTTTTCCTATTGGGATTGGATATCCATTAGGAGGTTTCTTTCTGAGAGCTGCCCATTGATTCGTGCATACGGAGCCATCCGATTCAACGCAAAAGCTAAGGTGTCATCAGAGTGGCTGCCTTTCGGTTCTTTCTACTTCGTGATTCCTCAGGTTGAGTTTAATGAGCTTGAAGGAGGATCGATGCTCACTACGACCATTGCGTGGGACAATACAATTTCTTGGTCCTGGGAAGATGCAATCAATGCTCTCCAAGAAACCCTTAGCAAGGTTTCTGCTTCGATTGTGAGGTTTCCGAAACAAGCTCCTCCAACATTAATACTAAGTAGCCATGATATTCCAAGTAAAATATATTGGGATATTGCTGTTAACAGAGCTTTGGAGATGATAAAGAAAAACAACTCCTTACTAACCAAGGTTGTGCTGGCTCGTAGTACAAGAGTAGTGCCTACTACTAACATTGATCCGCTTACGTGGTTAGCTTGCTTAACGGTTGAGAGCGAAAATGCATACCAGTTTCTCCTTCAGCCGCCAAATGCACCTGCATTTATCGGAAATACACCAGAGCAACTATTTCACAGAAAATGGCTCCACATTACTAGTGAGGCTTTGGCTGGAACTCGAGCTAGAGGAGTGTCGATGGCACTGGATCGTCAAATAGAACTTGACTTGCTTACAAGTCCAAAGGATGATATTGAGTTCACCATAGTAAGAGATACCATAAGAAGAAAATTAGAGGGAGTGTGTGAAAAGGTTGTAATTAAGCCAAAGAAAATGATAAGAAAGCTCCCCAGGATCCAACATTTATTTGCTCAATTAGCCGGCAGGTTAAGAAGCGAAGAAGACGAGTTTAAAATTTTGTCATCTCTTCACCCAAGTCCAGCAGTTTGTGGGTTTCCAACAGAAGAGGCACAACTTTTAATTGCAAAAACAGTATTTGATAGAGGGATGTATGCCGGACCTGTTGGTTGGTTCGGCGGCGGAGAGAGCGAGTTTGCTGTTGGCATCAGGTCAGCATTGGTGGAAAAGGATCACGGTGCATTGATATATGCTGGAACAGGGATAGTGGAAGGAAGCAATCCTTACTTGGAGTGGGATGAACTAGAACTCAAGACATCTCAGTTCACCAAGTTGCTCAAACTTGACTTGCCTCTCAGACAAAAAGTAGATTGTAAATGA 1662 0.4452 MATASAHKSLTKCTNTFLLFPLSKKQHSIYTLHFHQRPLCHGCYLSMNGCRKGQSRGPVGTIETQTLEPVATTSMALYSLKMTISKMKSEPPYRSSSGIVRLQVPIEEEEVEAIDWLHSQNHLLLPRCFFSGREHNSFDSNGRSLVSVAGVGSAVSFCQPHPFSYWDWISIRRFLSESCPLIRAYGAIRFNAKAKVSSEWLPFGSFYFVIPQVEFNELEGGSMLTTTIAWDNTISWSWEDAINALQETLSKVSASIVRFPKQAPPTLILSSHDIPSKIYWDIAVNRALEMIKKNNSLLTKVVLARSTRVVPTTNIDPLTWLACLTVESENAYQFLLQPPNAPAFIGNTPEQLFHRKWLHITSEALAGTRARGVSMALDRQIELDLLTSPKDDIEFTIVRDTIRRKLEGVCEKVVIKPKKMIRKLPRIQHLFAQLAGRLRSEEDEFKILSSLHPSPAVCGFPTEEAQLLIAKTVFDRGMYAGPVGWFGGGESEFAVGIRSALVEKDHGALIYAGTGIVEGSNPYLEWDELELKTSQFTKLLKLDLPLRQKVDCK* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1796 553 TIGRFAM isochor_syn: isochorismate synthase 183 539 IPR004561 GO:0008909|GO:0009058
Ahy12g1796 553 SUPERFAMILY ADC synthase 125 544 IPR005801 GO:0009058
Ahy12g1796 553 Pfam chorismate binding enzyme 280 532 IPR015890 -
Ahy12g1796 553 PANTHER ISOCHORISMATE SYNTHASE 2, CHLOROPLASTIC 37 549 - -
Ahy12g1796 553 PANTHER - 37 549 IPR044250 GO:0008909
Ahy12g1796 553 Gene3D Anthranilate synthase 75 542 IPR005801 GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1796 Ahy-Chr12 96444599 96450828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1796 K02552 - gmx:100804974 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1796 12 96444599 96450828 Ahy2g1542 2 82527229 82533344 hybridization