Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1753 ATGGCTCAACAGGAAGAAGGGTGGCCATTGGGGCTGAGGTTATTGAATGCAAGAATCGGAATGGTGAGAAATGGCGATTTATCAGGATCAGTCTCATTCACCACTATGCTCACTAGTTCCACCACCCCTTCAATTGATTCTTCCTCAGATCTTGATACTCAGGAGTCCACAGGAACATTCTTCCATGACAGGAGCATCACACTAGGGAGCCTCATTGGTATCTCTAGCTTCTTAACACTCTCGAGAAGATCAACAACAACAACAATGGAGGAGCCTTCATCATCAAATAATAAAAAAAAGAATCATCACAAGCTGATGAAACCATACTGGTTATTCTCACTTTGTTCAAAGCTAAATACTGATGCAGTGATTCTGCATAGTGATGCTGATGCTCCTTCTCTCGGTCAGTACCTCGAGGCAGAGAGAAGAGCAGCAGCCGCCACCGCCACAAGTAATAATCAAAGAAGGAACCAATGTCAAGAAATGTATGTACCTAATGATTTTGACACAATTCAAGATTCAAATTCACTATTTCATGGAGACCAAGTTGCTGTTCTGTCACCAGATTCAATGGATGAAGAAGAGGAGGCAAATAAAGAATGGGAACAAAGCAACAATAGATTTGGAGCAACAATAATTTTCCCTTGTTTATGTGGATAA 660 0.4136 MAQQEEGWPLGLRLLNARIGMVRNGDLSGSVSFTTMLTSSTTPSIDSSSDLDTQESTGTFFHDRSITLGSLIGISSFLTLSRRSTTTTMEEPSSSNNKKKNHHKLMKPYWLFSLCSKLNTDAVILHSDADAPSLGQYLEAERRAAAATATSNNQRRNQCQEMYVPNDFDTIQDSNSLFHGDQVAVLSPDSMDEEEEANKEWEQSNNRFGATIIFPCLCG* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1753 219 PANTHER - 1 218 IPR040344 -
Ahy12g1753 219 PANTHER 60S RIBOSOMAL PROTEIN L36 1 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1753 Ahy-Chr12 94967800 94977429 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1753 - - gmx:100779898 165.236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1753 12 94967800 94977429 Ahy12g1753 12 94967800 94977429 ECH
Ahy12g1753 12 94967800 94977429 Ahy2g1501 2 80019565 80024307 hybridization