Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1615 ATGGGTGGGAAACTCTTCTTTTGGCTCGTCATTTGTTTCCCTTCCAGCATTGCCCTTCTCGCCACAACTTTCTACCAGGTTTTGATCCTATCTGACTTGGAAGCTGACTATATAAACCCGTTCGACGCGGCGTCTCGGATTAACTACTTCATTCTTCCTGAGTACATAGGACAGGGAGCTCTCTGCGTACTGTGCCTCGTCACTGGACACTGGTTCATGTTCTTGCTCTCTCTTCCAGTTACTTGCTATCACATCATGCGATATGTGAAACGGGAGCACCTTATTGATGTTACTGAAGTGTTTAGAGGACTTAATGCTGAGAGGAAATTTCGGCTAGCCAAACTTGTCATGTACTTAATACTCCTCATTGTAGTCATATTCAGGCTTACATTAATCGGTATCTACTATTTAGGCATTGAAACCGATGATGAACCGGGAAGCTTCTGGTAA 450 0.4422 MGGKLFFWLVICFPSSIALLATTFYQVLILSDLEADYINPFDAASRINYFILPEYIGQGALCVLCLVTGHWFMFLLSLPVTCYHIMRYVKREHLIDVTEVFRGLNAERKFRLAKLVMYLILLIVVIFRLTLIGIYYLGIETDDEPGSFW* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1615 149 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Ahy12g1615 149 PANTHER CORNICHON-RELATED 3 130 - -
Ahy12g1615 149 SMART Cornichon_2 6 127 IPR003377 GO:0016192
Ahy12g1615 149 PANTHER PROTEIN CORNICHON 3 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1615 Ahy-Chr12 87523461 87529009 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1615 K20368 - gmx:100500341 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1615 12 87523461 87529009 Ahy12g1615 12 87523461 87529009 ECH
Ahy12g1615 12 87523461 87529009 Ahy2g1383 2 73061630 73066915 hybridization
Ahy16g0377 16 7326933 7331755 Ahy12g1615 12 87523461 87529009 PCT
Ahy6g0950 6 12423674 12427645 Ahy12g1615 12 87523461 87529009 PCT
Ahy12g1615 12 87523461 87529009 Ahy16g0377 16 7326933 7331755 PCT
Ahy12g1615 12 87523461 87529009 Ahy6g0950 6 12423674 12427645 PCT