Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0735 ATGGAGCTAAGTAAAGTGACCTTAGAGATCTTCTCAAAGCTGGAGCAGAAATGGCTCTCTCATTGCACCAAAGAAGCGAACAGCAAGAAAACCCGCATTCTCAGCATCGACGGCGGAGGAACCACCGCCATTGTCGCCGGTGCGGCCCTACTCCGCCTCGAGGATCAGATCCGTCACAACATCTCCGATCCCCACGCTCACATCGCAGATTTCTTCGACGTGGTTGCCGGCACCGGCATAGGCGCAGTCCTCGCCGCGATGATCACCGCCGCCGACTCCTTCGGCCGTCCGCTCTATACCGCTCGCGACGCTGTGAATCTCGTCGCCGATCGAAACTCCGACCTGTACAAGCTCAAATCCGCCGGAATATTCCGTCGGCGCCGGAGATTCTCTTCCCGGAGCATGGAAACAGTGTTGAAGGAAGTGTTCACGAGAAAAGACGACGGAAAATCGCTGACATTGAAGGACACGTGCAAGCCTCTGCTTGTTCCATGCTTCGACCTCAAGAGCTCAGCGCCGTTCGTGTTCTCACGCGCTGACGCGTGCGAGTCTCCGAGTTTCGACTTCGAGCTCTGGAAGGTTTGCCGTGCCACGTCGGCCACTCCTAGCTGCTTCAAGCCGTTTCCGTTGGAATCCGTTGACGGAAAAAAATCCTGCTCCGCCGTCGACGGCGGACTCGTCATGAACAATCCTACCGCCGCAGCAGTCACGCACGTGCTTCACAACAAGCGCGATTTCCCCGCGGTTAACGGCGTCGAGGACCTCCTCGTCCTCTCCATCGGAAATGGATCATCCAGCGCCAAAGCGCGCGAGAATCACGAACCTTCTGTGATCGACATTGTCCTCGACGGTGTTTCCGAGACGATTGACCAGATGTTAGGAAACGCATTCTGCTGGAACCGCAATGATTACGTCAGAATCCAGGCATTTGGTTTGGGAAGTGAAGGAACGGTAACGGAGGAAGTGGAAGAGAAGAGTGAGGTGCTGAAAGAGAGGGCTTTGGAGTCGTTACCGTTTGGCGGGAAGCGGTTACTGACAGAGACTAACGGAAACAGAATCGATAGCTTCGTGCAACGGCTTGTTGCCTCCGGAAAACCCAGCCCGCTGTCAAGTCCCCGCAAGAATTCCGCCGTCAACCCTCTGGTTAACGGCCGCTAG 1158 0.5604 MELSKVTLEIFSKLEQKWLSHCTKEANSKKTRILSIDGGGTTAIVAGAALLRLEDQIRHNISDPHAHIADFFDVVAGTGIGAVLAAMITAADSFGRPLYTARDAVNLVADRNSDLYKLKSAGIFRRRRRFSSRSMETVLKEVFTRKDDGKSLTLKDTCKPLLVPCFDLKSSAPFVFSRADACESPSFDFELWKVCRATSATPSCFKPFPLESVDGKKSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPAVNGVEDLLVLSIGNGSSSAKARENHEPSVIDIVLDGVSETIDQMLGNAFCWNRNDYVRIQAFGLGSEGTVTEEVEEKSEVLKERALESLPFGGKRLLTETNGNRIDSFVQRLVASGKPSPLSSPRKNSAVNPLVNGR* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0735 385 PANTHER INACTIVE PATATIN-LIKE PROTEIN 9-RELATED 1 385 - -
Ahy12g0735 385 MobiDBLite consensus disorder prediction 363 385 - -
Ahy12g0735 385 CDD Pat17_PNPLA8_PNPLA9_like 33 337 - -
Ahy12g0735 385 Pfam Patatin-like phospholipase 34 235 IPR002641 GO:0006629
Ahy12g0735 385 SUPERFAMILY FabD/lysophospholipase-like 29 312 IPR016035 -
Ahy12g0735 385 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 34 236 IPR002641 GO:0006629
Ahy12g0735 385 Gene3D Cytosolic phospholipase A2 catalytic domain 18 366 - -
Ahy12g0735 385 MobiDBLite consensus disorder prediction 364 385 - -
Ahy12g0735 385 PANTHER PATATIN-LIKE PROTEIN 6 1 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0735 Ahy-Chr12 12636007 12637953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0735 1 385 Acyl Lipid Metabolism Gene Families AT3G63200 68.782 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0735 - - gmx:100777557 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0735 12 12636007 12637953 Ahy12g0735 12 12636007 12637953 ECH
Ahy12g0735 12 12636007 12637953 Ahy2g0605 2 9254954 9256842 hybridization
Ahy16g0218 16 2351277 2353183 Ahy12g0735 12 12636007 12637953 PCT
Ahy6g1103 6 15962248 15964146 Ahy12g0735 12 12636007 12637953 PCT
Ahy12g0735 12 12636007 12637953 Ahy16g0218 16 2351277 2353183 PCT
Ahy12g0735 12 12636007 12637953 Ahy6g1103 6 15962248 15964146 PCT