Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0642 ATGTCTTCCACCTTTGTTGCTCTTCATAGTTCTCTTCTTCAATCTCAGTTTCTAGGCCAAGATGGCCTCACTCATCTCTACCATTCCAAAACCTTCATTCACACAAAACCAAAAGCATACAAAGTATGTGCCAAATTTGACATGCTGCAAATCATGGGAGGTAGAGGACTATGCAATGGAGAAGAAGGCCTTATACAAGAGCTGAAAAGACAAGTTGAGAATCCACCATCACCATCATCATCAGAACAAGAACAAGAGAATTTAGCACTGGCCAATGTTGCAGCAGAAGATGGTTTTGAGAAAGAGTTGATGGGGCTAACAGGTGGCTTCCCCGGTGGCGAAAAAGGCTTGAAGAAGTTCATCATGGAGAACCCTCCTAAAAAAGGTGATGGAATCCAAAGCTTGAAACTTTCGATGGCGAAGAAGCCAAAGCCACCGGAGCTTCCTCTTCTGCTTCCGGGAATGATCGCTATTGTGAGCAATCCGAATAATCCGTATTACATGTACTGTGGCATTGTTCAAAGGATCACTGATGGAAAAGCAGGGGTTCTGTTTGAAGGAGGGAACTGGGACAGGTTAATCACATTCAGGCTTGAGGAATTGGAGAGAAGAGAAAAGGGTCCTCCAATGAAGAATCCAAAGTCTTGTGTTCTTGAACCGTTTCTTGAGAAGAAATCATGA 681 0.4361 MSSTFVALHSSLLQSQFLGQDGLTHLYHSKTFIHTKPKAYKVCAKFDMLQIMGGRGLCNGEEGLIQELKRQVENPPSPSSSEQEQENLALANVAAEDGFEKELMGLTGGFPGGEKGLKKFIMENPPKKGDGIQSLKLSMAKKPKPPELPLLLPGMIAIVSNPNNPYYMYCGIVQRITDGKAGVLFEGGNWDRLITFRLEELERREKGPPMKNPKSCVLEPFLEKKS* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0642 226 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT S, CHLOROPLASTIC 3 225 IPR021659 GO:0009767
Ahy12g0642 226 Pfam NAD(P)H dehydrogenase subunit S 151 202 IPR021659 GO:0009767
Ahy12g0642 226 MobiDBLite consensus disorder prediction 204 226 - -
Ahy12g0642 226 Gene3D - 146 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0642 Ahy-Chr12 10365822 10366733 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0642 K00345 - gmx:100527145 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2372 14 126461556 126462483 Ahy12g0642 12 10365822 10366733 PCT
Ahy4g2091 4 114729298 114730126 Ahy12g0642 12 10365822 10366733 PCT
Ahy12g0642 12 10365822 10366733 Ahy14g2372 14 126461556 126462483 PCT
Ahy12g0642 12 10365822 10366733 Ahy4g2091 4 114729298 114730126 PCT