Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0624 ATGACAAGATTGAGAAAAGCAACAGCAAAGGAGGGGAAAAGAAGAAGTCCTCGAATATCTGAATTGATGAGGCCGTCAGGGGCCAAATCCCATGGTGTTCAGAACAATCGAACCACAAACAAGAGAAAATTTCAAGAGTTCATGGCCTCAGAACAGGTTGAGGAACATTCTCACGACCATCAACATGTCAAAAAGAAAAGTGATCAACAAATTAAGGTGACATCTTCTGTTTATGTTCCGGAGAAACGAATACTTGAACTTGTCCTTGACACTTTACAAAGGAAAGACAACTATGATATATTTGCTGAACCGGTTGATCCAAATGAGGTTGAGGACTATTACACTATAATTGAAGAGCCTATGGATTTTGGCACAATGAGGGCTAAACTACATGAAGGGATGTATAAGAGTCTAGAACAATTTGAGCACGATGTATTTTTAATATTCAACAATGCAATGCATTTTAATTCTTCTGGTACCATATATTTCAGACAGGCTCGTGCTATAAAAGAACTAGCTAGGAAAGTGTTTGATGTATTAAAAAGCAGCCCAGAGAAGTTTGAATTGGAGTTCTCAGAAACGAAGCGAAAAGTTGTTGGTCGGAGAAACCAAGGAGGTTTTAGCAGGGATTCAACAACAACTACAGACATGAAATCCATAATCTCAATTCAACACACACGAAAAGTTGTTATGTCTATGCATGATGATGAAGGCAGAGATAATCTTGAGGTTCCTATAGGAGGCTCTAAAGAGGGCAATGGATATAAAACTATGGTGGATGACAAGCGTTGTACTTATAAGCCTTTGTCTTTTACTAAGGATGATTCAATATTTACCACAGTTTATGGTAAATTGAACCAACTTGAGCGTGTTAATAAGCGAGATGTTGGGTATAAAGATAGCTTGATGCTGTTCACTAAAGATTTAGGACCTACGGCCAAAAACATAGCGAAAAGAAAAATACTTGAATGTGAAGTTCGTAGTGCAGCATTTGAAGACGCATGTCGATCAGATTCTAATGGCAATGCAAGAAGAGGTCCCTTTCTTTCTACTACTCAAGTAGGGAAGAAGAATCAAGGGCTTATTCCGTTTAATACCAATCCTCATCATTTTGATCTACGCCATTTCCTCTGCAATCGCAGTTTTCAGCACTAA 1155 0.3835 MTRLRKATAKEGKRRSPRISELMRPSGAKSHGVQNNRTTNKRKFQEFMASEQVEEHSHDHQHVKKKSDQQIKVTSSVYVPEKRILELVLDTLQRKDNYDIFAEPVDPNEVEDYYTIIEEPMDFGTMRAKLHEGMYKSLEQFEHDVFLIFNNAMHFNSSGTIYFRQARAIKELARKVFDVLKSSPEKFELEFSETKRKVVGRRNQGGFSRDSTTTTDMKSIISIQHTRKVVMSMHDDEGRDNLEVPIGGSKEGNGYKTMVDDKRCTYKPLSFTKDDSIFTTVYGKLNQLERVNKRDVGYKDSLMLFTKDLGPTAKNIAKRKILECEVRSAAFEDACRSDSNGNARRGPFLSTTQVGKKNQGLIPFNTNPHHFDLRHFLCNRSFQH* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0624 384 MobiDBLite consensus disorder prediction 29 43 - -
Ahy12g0624 384 MobiDBLite consensus disorder prediction 1 20 - -
Ahy12g0624 384 ProSiteProfiles Bromodomain profile. 93 163 IPR001487 GO:0005515
Ahy12g0624 384 CDD Bromodomain 81 177 - -
Ahy12g0624 384 Gene3D - 41 202 IPR036427 GO:0005515
Ahy12g0624 384 MobiDBLite consensus disorder prediction 1 43 - -
Ahy12g0624 384 PANTHER BROMODOMAIN CONTAINING PROTEIN, EXPRESSED 6 351 - -
Ahy12g0624 384 SUPERFAMILY Bromodomain 76 187 IPR036427 GO:0005515
Ahy12g0624 384 SMART bromo_6 74 182 IPR001487 GO:0005515
Ahy12g0624 384 Pfam Bromodomain 88 167 IPR001487 GO:0005515
Ahy12g0624 384 PRINTS Bromodomain signature 144 163 IPR001487 GO:0005515
Ahy12g0624 384 PRINTS Bromodomain signature 110 126 IPR001487 GO:0005515
Ahy12g0624 384 PRINTS Bromodomain signature 126 144 IPR001487 GO:0005515
Ahy12g0624 384 PRINTS Bromodomain signature 96 109 IPR001487 GO:0005515
Ahy12g0624 384 PANTHER BROMODOMAIN CONTAINING PROTEIN 6 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0624 Ahy-Chr12 10102130 10105868 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0624 K22184 - gmx:102667935 352.443