Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0597 ATGCAACGCGCAAGATCGCTCCTAACAAGGTTTAATCCAATCGCATACAGATACAGATACAGATGCCAAAGCCGAACCCTGTGTTCTTCTTCGAACGAGGAAGTTGTGGTTGTTGAAGGAAACGGTTACTCGAGAATGGCAATTCTCAACAGACCCACTGCTCTCAACGCCCTCAACACCTCCATGGTGGCTACCCTCACCAAACTTTACCGAGCTTGGGAAGATAACCCCGACGTTGGCTTTGTCACCATCAAGGGCAGTGGTCGGGCATTTGCAGCTGGCGGTGATATTGTCGCCATTTACCATTTCATCAACAGAGCCAACATGGAAGCCTGCAAGGAATTCTTCCGAACAATATATCGTTTTATTTACGTCATAGGTACATATATGAAGCCACATATCGCTCTTCTGAATGGCATTACCATGGGTGGTGGAGCTGGAATTTCAATCCCCGGCACTTTTCGAGTTGCAACCGACAAAACTATTTTTGCTACCCCTGAAGTTCTTATTGGATTTCACCCTGATGCTGGAGCATCTTTCTACCTTTCACATTTACCTGGTCACTTAGGCGAATACTTGGCCCTAACAGGGGAAAAGCTCAATGGAGTAGAGATGGTTACTTGTGGACTTGCTACACACTACTCACTAACTGCAAGGCTCCCGTTAATTGAAGAACAGCTGGGGAAATTAGTTACTGATGATCCTTCTGTCATTGAAACCACTTTAGAACAGTATGGTGACCTTGTACACTCAGATAGCAGTAGTGTACTTCAAAGGATTGAAATTGTAGATAAATGCTTTTGCCATGACACAGTGGAAGAGATTGTTGATTCTTTGGAAAGAGTGGCAAGTGAAACAAATGATGCATGGTGCATTTCTACCCTAAATAGACTTAAAGAAGCTTCGCCATTGAGCTTGAAGGTTTCCTTGAGATCAATACGAGAGGGTAGATTTCAGACTCTTGACCAGTGCTTGTCACGTGAGTACCATATGACTTTACAAGCAACATCTAAGCAGATTTCTGGTGACTTTTGTGAGGGGATAAGGTCTCGTGTGGTGGATAAGGACTTTGCACCAAAGTGGGATCCTCCAACATTGGAAAAGGTGTCTCAAGACATGGTGGATCAGTACTTCTCACCTCTAAGTGAATTTGAACCTGGTCTAGGGCTCCCCACAAAAGTTCGAGAAGCATTTTTGTAA 1200 0.4433 MQRARSLLTRFNPIAYRYRYRCQSRTLCSSSNEEVVVVEGNGYSRMAILNRPTALNALNTSMVATLTKLYRAWEDNPDVGFVTIKGSGRAFAAGGDIVAIYHFINRANMEACKEFFRTIYRFIYVIGTYMKPHIALLNGITMGGGAGISIPGTFRVATDKTIFATPEVLIGFHPDAGASFYLSHLPGHLGEYLALTGEKLNGVEMVTCGLATHYSLTARLPLIEEQLGKLVTDDPSVIETTLEQYGDLVHSDSSSVLQRIEIVDKCFCHDTVEEIVDSLERVASETNDAWCISTLNRLKEASPLSLKVSLRSIREGRFQTLDQCLSREYHMTLQATSKQISGDFCEGIRSRVVDKDFAPKWDPPTLEKVSQDMVDQYFSPLSEFEPGLGLPTKVREAFL* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0597 399 SUPERFAMILY ClpP/crotonase 34 364 IPR029045 -
Ahy12g0597 399 CDD crotonase-like 49 213 - -
Ahy12g0597 399 Pfam Enoyl-CoA hydratase/isomerase 45 378 IPR045004 -
Ahy12g0597 399 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 26 398 IPR032259 GO:0003860
Ahy12g0597 399 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 1, MITOCHONDRIAL 26 398 - -
Ahy12g0597 399 Gene3D - 30 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0597 Ahy-Chr12 9575509 9579920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0597 1 399 Acyl Lipid Metabolism Gene Families AT4G31810 58.809 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0597 K05605 - gmx:100801676 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0597 12 9575509 9579920 Ahy12g0597 12 9575509 9579920 ECH
Ahy12g0597 12 9575509 9579920 Ahy2g0505 2 7087980 7092268 hybridization