Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0569 ATGGCCCAAGCAATGGCATCAATGGCAGGTTTGCGAGGATCATCACAGGGTGTGCTTGAAGGGAGCATCCAGCTGAGTGGGTCAAACCGGTTGATGAATGTGGCAAGTGGAAGCAACAGCAGCAGGGTGGGTGCCACGTCAGCAAGATCAGTGAGTGTGAGAGCACAACATCAAGAGGCTTCTCCACAGAGCAGCAGAAGAGCCATGATTGGTGCTGCTGCTGCTGGTTTGGCTTCTGCTTCCTTTGTTCAAGCTGTTCTTGCTGATGCCAAACCCATCAAAGTTGGCCCTCCTCCTCCTCCCTCCGGTGGACTCCCTGGAACACTGAACTCTGATGAAGCAAGGGACCTTAAGTTGCCATTGAAAGACAGGTTCTTCCTTCAGCCATTGTCACCAAGTGAGGCAGCACAAAGGGCAAAGGAGTCAGCAAAGGAAATTGTAAATGTGAAGCAGTTGATAGACAAGAAGGCATGGCCATATGTTCAGAATGATCTCCGTCTCCGCGCCGAGTATCTTCGATATGACCTTAACACTGTTGTCTCTGCAAAGCCTAAGGATCAGAAGAAACCCCTCAAGGATCTCATTGGCAAGCTCTTCCAGGATATCAGCAATCTTGATCATGCAGCAAAAGTGAAGAGCACCCCAGAAGCAGAGAAGTACTATGCTGAGACTGTATCTTCTCTGAATGATGTTCTTGCCAAACTTGGTTAA 711 0.4923 MAQAMASMAGLRGSSQGVLEGSIQLSGSNRLMNVASGSNSSRVGATSARSVSVRAQHQEASPQSSRRAMIGAAAAGLASASFVQAVLADAKPIKVGPPPPPSGGLPGTLNSDEARDLKLPLKDRFFLQPLSPSEAAQRAKESAKEIVNVKQLIDKKAWPYVQNDLRLRAEYLRYDLNTVVSAKPKDQKKPLKDLIGKLFQDISNLDHAAKVKSTPEAEKYYAETVSSLNDVLAKLG* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0569 236 MobiDBLite consensus disorder prediction 93 112 - -
Ahy12g0569 236 Gene3D - 89 236 IPR023222 -
Ahy12g0569 236 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 46 236 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Ahy12g0569 236 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 5 236 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Ahy12g0569 236 MobiDBLite consensus disorder prediction 32 65 - -
Ahy12g0569 236 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 5 236 - -
Ahy12g0569 236 MobiDBLite consensus disorder prediction 32 67 - -
Ahy12g0569 236 SUPERFAMILY Oxygen-evolving enhancer protein 3, 125 235 IPR023222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0569 Ahy-Chr12 9206343 9208164 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0569 K08901 - gmx:100306034 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0569 12 9206343 9208164 Ahy2g0480 2 6738132 6739933 hybridization