Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0554 ATGGAGTTCTGGAACCTTTTCATGGTTGCATTAATGCCAGTTGTAAAGGTGCTTTTGATCACTGCTCTTGGGACAATTCTTGCCATTCGGCGTTTTGGTATACTTGGGGACACTGCCAGGAAAAACTTGAATCATATGGTATTTTATGTGTTTGGGCCTGCTATTGTTTGTAGCAGCCTCGCAAAAACCATAACTCTAAGGAACGTCGTTATTTTGTGGTTCATGCCGGTGAATGTTCTTCTCACATTTCTTATTGGAACAGCTCTTGGATGGTTACTTATTAAAATAATCAGAGTTCCTCTTCATCTTCATGGCCTTGTCTTAGGTTGTTGTGCTGCAGGGAATCTGGGAAATTTACCTCTTATTATAGTTCCAGCTGTCTGTAAAAAAAGAAACAACTCTTTTGGAGATGTGGATGTTTGCAAAAAGAATGCATTAGCATATGCTTCTCTCTCAATGGCACTAGGAAGCATTTACATTTGGTCTTATGTATACAACATAGTCCGCATATATTCAAGCAAGGTTTCATCAGTTGATGATTCAAAAGTAAAAGCAGTGATCATTGCAACAGAAAATGATGATATTGATTCAGAAAACCCTTCAAAATTGGTCACTGTTGATGACAAATCACAAACTAATGATCATGTGAAGCAACTTGAAATTGAATCTGTAGTGTCTCACCAACAAATAGCAAAGATATCATCAACAAAGGAAAAAATTAGGAATCAGATAAAGGTATTAGCAGAAAAGATCAATTTGAAGGTACTATTTGCACCAGCAACAATTGGAACGATAATTGGTTTAATAATTGGAATTGTTCCTCAATTTCGAAAAGTATTAGTTGATGAAAATGCACCTCTTTTTGTGATTCAAGACTCTTTAGTCATGTTGGGGGATGCAGCAATTCCAGCAATGACCTTGTTGGTTGGTGCAAATCTTGTTAAGGGTTTAGAGGGAGTAAGAAAGCAACTTCCACTTGTTATTGGGATTACTATAGTTAGATTTATTGCCTTGCCAGCAATAGGTATAGGAATTGTTAAAGGTGCTACTCATTTTGGCTTGATCCACCATGATCCATTATATCAATTTCTTTTACTACTTCAATTTGCTCTTCCTCCTGCAGTAGCCATGAGTACAATGGTTCAATTATTTGGAGGTGGTGAAGGTGAATGCTCAGTTATCATGTTAGCAACTTATTCTTGTGCTGCAGTTTCCCTTACTCTTTGGTGCACATTCTTTGTGTGGCTTGTATTATCATAA 1260 0.3706 MEFWNLFMVALMPVVKVLLITALGTILAIRRFGILGDTARKNLNHMVFYVFGPAIVCSSLAKTITLRNVVILWFMPVNVLLTFLIGTALGWLLIKIIRVPLHLHGLVLGCCAAGNLGNLPLIIVPAVCKKRNNSFGDVDVCKKNALAYASLSMALGSIYIWSYVYNIVRIYSSKVSSVDDSKVKAVIIATENDDIDSENPSKLVTVDDKSQTNDHVKQLEIESVVSHQQIAKISSTKEKIRNQIKVLAEKINLKVLFAPATIGTIIGLIIGIVPQFRKVLVDENAPLFVIQDSLVMLGDAAIPAMTLLVGANLVKGLEGVRKQLPLVIGITIVRFIALPAIGIGIVKGATHFGLIHHDPLYQFLLLLQFALPPAVAMSTMVQLFGGGEGECSVIMLATYSCAAVSLTLWCTFFVWLVLS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0554 419 Pfam Membrane transport protein 10 409 IPR004776 GO:0016021|GO:0055085
Ahy12g0554 419 Coils Coil 230 250 - -
Ahy12g0554 419 PANTHER - 1 417 IPR045033 GO:0080162
Ahy12g0554 419 PANTHER EFFLUX CARRIER FAMILY PROTEIN, PUTATIVE-RELATED 1 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0554 Ahy-Chr12 8958987 8963087 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0554 K24139 - gmx:100797947 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0554 12 8958987 8963087 Ahy2g0471 2 6620251 6624211 hybridization