Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0539 ATGAAGTTGATGATGGCAAACATAGGAAGCTGTATCTTCTCCCTGCTTTTTTTGTTGTCTCTAACTCTTTTCTTCTCTCCAACCCTTGGAAGAAGTATCAATCATAATAGGAAGCATGTGATTGGGTTGTTCATATTTGGGGATTCATTCTTAGATGCAGGGAACAACAATTACATAAACACAACACCATATGATCAAGCTAATTTCTTTCCTTATGGTCAAACCTACTTCAACTTCCCCACTGGCAGATTCTCTGATGGTCGCTTGATTTCAGATTTTATAGCTGAATATGCGAACCTGCCATTGATACCACCATTTCTACAACCTGGTAATTACACACAATTCTATGGTGGAGTGAACTTTGCGTCTGGTGGAGCAGGTGCTCTTGTTGAAACTTTTGAAGGTTCGGTAATACCTCTGAAAACACAAGCTAGAGATCACTTCAAGAAAGTAGCAACATGGTTGGAGCACAAGTTAGGAAGTTATGAAGCTAAAATGTTGTTATCAAGAGGTGTATACATGTTTAGCATTGGAACCAACGATTACCTTAGCCCATTCTTGACTCAATCTGATGTTCTTAATTCTTTCTCTCACTCACAATATGTTGGCATGGTGGTTGGTAACATCACTTCCATTATCAAGGGAATATATAAGAAAGGGGCTAGAAAGTTTGTGTTCATGAACTTGCCACCATTGGGTTGTCTTCCAGGGATCAGAATAATAAATTCAGATGGAAATGGAAGCTGCTTACAACAACTTTCATCACTTGCAAAATTACATAATCAAGCTCTATCTTTGGCTCTCTTTAAATTGGAGAAGCAGCTAAAGGGCTTCAAATATTCTCTCTATGATTTCAATGCTGATGTAACTCAAATGATCAACCACCCCTTTAAATATGGTTTGAAGGAAGGAAAATCAGCATGCTGTGGGAGTGGAGCATTTAGAGGAGAGTACAGTTGTGGGGGTAAAAGAGGGAATAAGCATTTTGAGTTATGTGACAAACCCAATGAATATTTGTTTTGGGACTCATACCATCTTACAGAAAGTGCTTATAAACAATTGGCAACTAGGATGTGGGCTTACACAACTAACTCTCACTTTCTTGGGCCTTACACTATTAGTGATTTCTTCTAA 1134 0.3845 MKLMMANIGSCIFSLLFLLSLTLFFSPTLGRSINHNRKHVIGLFIFGDSFLDAGNNNYINTTPYDQANFFPYGQTYFNFPTGRFSDGRLISDFIAEYANLPLIPPFLQPGNYTQFYGGVNFASGGAGALVETFEGSVIPLKTQARDHFKKVATWLEHKLGSYEAKMLLSRGVYMFSIGTNDYLSPFLTQSDVLNSFSHSQYVGMVVGNITSIIKGIYKKGARKFVFMNLPPLGCLPGIRIINSDGNGSCLQQLSSLAKLHNQALSLALFKLEKQLKGFKYSLYDFNADVTQMINHPFKYGLKEGKSACCGSGAFRGEYSCGGKRGNKHFELCDKPNEYLFWDSYHLTESAYKQLATRMWAYTTNSHFLGPYTISDFF* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0539 377 Gene3D SGNH hydrolase 31 366 IPR036514 -
Ahy12g0539 377 SUPERFAMILY SGNH hydrolase 43 362 - -
Ahy12g0539 377 CDD SGNH_plant_lipase_like 43 359 IPR035669 -
Ahy12g0539 377 PANTHER GDSL ESTERASE/LIPASE 5 10 377 - -
Ahy12g0539 377 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 10 377 IPR044552 -
Ahy12g0539 377 Pfam GDSL-like Lipase/Acylhydrolase 43 356 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0539 Ahy-Chr12 8715159 8720857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0539 17 359 Acyl Lipid Metabolism Gene Families AT4G10950 28.612 5.57e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0539 - - gmx:100819379 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0539 12 8715159 8720857 Ahy2g0465 2 6523849 6529932 hybridization