Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0504 ATGGATGTCTCTACTCACAAATTCTTCCAATCTACATCTGTATTGGCACCACTTGGGGAGCCAGTACCTATTGAATCCAACATGAGTAGCTTGTATGGGAAGAACAAGAACAGTAACCCTTTTGTAGATGATGACTTCCCTGACCCACTTTGCAAGCTCAATCTCAAGGAGACTTCTGAATTTGTCAAGTCATTTCCAGTGCCAAATGCTAATAATGATGAAACCAGAAGCACCATTGTTGATGTTCCAGCTCAGAGAAGAGAACAACAACAAAGGAGAGTAGCATTAGAGGCTCCTGCAACACCTGGTAGGCCATTTTTCAGCTTCACAACCATTGGAAGGAACCTTTCAAGAAAGAGCATTCCTTCCAAATGGGATGATGCTGAGAAATGGCTCATGAGCAGTTCATGCCATGACTCACCAGCACATGTGAATGCTGTGAATGTGAATGTGAAGAAGGTATCTGAATCTGAATCTGAGTCCTCAAAAATGGAGTGTTTCTCGGACAAGTCAAGGGTCACAGTCACTGAGGAAAGGGACTCAAAAGCTGCCCCAAACTTCAGAAGGTCTTCATCTTTGGACCACCAAAACATGTTTGGTGCTTTCAATGGGGTCTCATGCCCAACAGACATAGTACTAAAAGATAAGTTCACTGAGAGCATAGAGCCAATTTTGCCAAGTTTCAGATACTCAGAGCCAACTAAAGAAGGATTCTTGTTTAGAAACAATGCTGGGGATGCAATGAAAGATGCTTGCACAGAAATGGCTTATCATCATCATCATCAACAACAAAATGAGATTCAACACAGAGATGTTGGGACTGAGATGACACCTCTTGGAAGCTCCACAACTTCAAGGTGCCATACACCAATCAAGAGTTCATCCCCTCAGAGGCACAATACTCCTGAAAGTAGGTCAGGACCATTGGCTATGGCAAACACCAATAGCACTACCTGCAATGATCTTATTCAGCTTGAAGAGTGCCATTTTTCCAAATTGCAACTGGGGACACAATATGACTTGGTTACTTCAAATTGGAGCTCAAGTGGAGAAGAAGAGGAGGAAATATCAAAGAGTTTGAGGCATAATGGTAGCAAGAAAGGTGATCCTGAATACAGGGCTGCTACATGGGAAGAAGAGGAGAAGACTAAGTGCTGTCTCAGGTATCAGAGAGAAGAAGCAAAAATTCAAGCTTGGGTAAACCTACAAAGTGCTAAAGCAGAAGCACAATCCAAAAAGCTTGAGGTGAAAATACAAAAGATGAGGTCAAACCTTGAAGAAAAATTGATGAAGAGGATGTCAGTGGTTCACAGAAAAGCTGAGGAATGGAGGGAATCAGCTAGGCAACAACACTTGGAGCAAATTCAGAAAGCCACTGAACAAGCTCAAAAGATGATACACAAACATCATCATCATAGCACTCAATTTTCAAGCCACACCACCATTTCTTGTGGTTGCTTCCCTTGTCATAACATCCATCACTAA 1485 0.4236 MDVSTHKFFQSTSVLAPLGEPVPIESNMSSLYGKNKNSNPFVDDDFPDPLCKLNLKETSEFVKSFPVPNANNDETRSTIVDVPAQRREQQQRRVALEAPATPGRPFFSFTTIGRNLSRKSIPSKWDDAEKWLMSSSCHDSPAHVNAVNVNVKKVSESESESSKMECFSDKSRVTVTEERDSKAAPNFRRSSSLDHQNMFGAFNGVSCPTDIVLKDKFTESIEPILPSFRYSEPTKEGFLFRNNAGDAMKDACTEMAYHHHHQQQNEIQHRDVGTEMTPLGSSTTSRCHTPIKSSSPQRHNTPESRSGPLAMANTNSTTCNDLIQLEECHFSKLQLGTQYDLVTSNWSSSGEEEEEISKSLRHNGSKKGDPEYRAATWEEEEKTKCCLRYQREEAKIQAWVNLQSAKAEAQSKKLEVKIQKMRSNLEEKLMKRMSVVHRKAEEWRESARQQHLEQIQKATEQAQKMIHKHHHHSTQFSSHTTISCGCFPCHNIHH* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0504 494 MobiDBLite consensus disorder prediction 275 313 - -
Ahy12g0504 494 Pfam Remorin, C-terminal region 372 471 IPR005516 -
Ahy12g0504 494 PANTHER OS02G0116800 PROTEIN 1 490 - -
Ahy12g0504 494 PANTHER OS11G0616300 PROTEIN 1 490 - -
Ahy12g0504 494 Coils Coil 404 431 - -
Ahy12g0504 494 Coils Coil 448 468 - -
Ahy12g0504 494 MobiDBLite consensus disorder prediction 345 374 - -
Ahy12g0504 494 MobiDBLite consensus disorder prediction 351 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0504 Ahy-Chr12 8269770 8273921 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0504 - - aip:107624762 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0504 12 8269770 8273921 Ahy2g0448 2 6270717 6274885 hybridization