Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0457 ATGGTAGTAGCTGCAGGTTCTAGTGTTGCTAAGCTCAACTTGAGAAAAGGGAAGGGTTCTTCTTATAATGTTATGAGCGGTGGTGATAACAGTGATGGAGATCTTTCCATTGTTAGTAATAACAGTGACAGTGAGTGTTGTTCATCATCAATGGTGGAGGTGGAAAGGGGTCCTTCATGTGTTTCATTCACCACTTTCAATATCTTGGCTCCTATTTACAAAAGGATTGATCCAAAGAACCAAAGCCTCAGGGAAAGTGAGTTCAGGTACTCCTGGTTGTCCAGGAATGAAAGTATTCTGAATTCCTTGCTTGCTGAATCATCTTCCATAATGTGCCTTCAGGAATTTTGGGTTGGAAATGAAGAACTTGTTCACATGTATGAGGAGAAACTAGGGGATGCTGGTTACCATCTCTTCAAGCTTGCTCGAACCAACAACCGGGGAGATGGTCTTCTTACTGCTATACACACAAAATATTTACATGTTGTGAATTATCGGGAGTTGTTTTTAAATGATTTCGGTGATCGTGTTGCTCAGTTGTTACACGTTCAGTCTATTGCCCCTGTTTCGCAAAACCAAATGGGAAGTCTTTACCAAGAGTTTCTTATTGTGAACACACACCTGTTATTTCCTCACGATTCGAGTCTATGTATAGTGAGATTGCATCAGGTTCACCAAATTTTGCAGCATGTGGAATTGTTTCAAAAAGAAAACAGGCTGAAACCGATGCCTATTATACTCTGCGGTGACTGGAATGGAAGTAAGAAAGGGCATGTATACAAGTTTCTTAGGTCACAAGGGTTTGTTTCATCATATGACTGTTATGCAGATTCCCACAAGTGGGTTAGTCACCGAAATCATAGAGGAAATATCTGCGGTGTCGACTTCATTTGGCTTTGCAATCCAAACCAACCACGGAAACCTTTGAAGACAAGTTGGGCTGAAGCTGTTTTTAGCATACTCAAGTACCAGCTACGAAAAGCTTCGCTGTCTGAAGACAGTGCATTTACATTTCTGAAGGGAGACAATTGTGCCGATGCTGTGACATATCTTAGTTTCCATGAGGCACTGCGGCAGGTAAAATTAGTTGATGTGCCTAATGGCTTATGCATTCAGCAGTTCCAAGATCTATGGAATCAAGCAGATGTTGATGGAAATGGGGTCATCGACTTAGAGGAATTCAAGCAAAAGATTTGGAACTCTACATGTCCAGAACCTGTATTGGAAAGCTTCAATGGTTGCATGGAGGATGTGAATGCGACGAATGAGCACGAAACCATCGGCTTTAAGGTGAAGACAGCGATGTTGTTCCCTCGAGAAGTCGAGAGAGGACATTGGCCAGAAGAGTATTCTCTTTCAGATCATGCTAGGCTCACTGCTGTGTTTTCACCAGCAAAGATGAGATGCTATGGATCACAAAAACTATAG 1428 0.4202 MVVAAGSSVAKLNLRKGKGSSYNVMSGGDNSDGDLSIVSNNSDSECCSSSMVEVERGPSCVSFTTFNILAPIYKRIDPKNQSLRESEFRYSWLSRNESILNSLLAESSSIMCLQEFWVGNEELVHMYEEKLGDAGYHLFKLARTNNRGDGLLTAIHTKYLHVVNYRELFLNDFGDRVAQLLHVQSIAPVSQNQMGSLYQEFLIVNTHLLFPHDSSLCIVRLHQVHQILQHVELFQKENRLKPMPIILCGDWNGSKKGHVYKFLRSQGFVSSYDCYADSHKWVSHRNHRGNICGVDFIWLCNPNQPRKPLKTSWAEAVFSILKYQLRKASLSEDSAFTFLKGDNCADAVTYLSFHEALRQVKLVDVPNGLCIQQFQDLWNQADVDGNGVIDLEEFKQKIWNSTCPEPVLESFNGCMEDVNATNEHETIGFKVKTAMLFPREVERGHWPEEYSLSDHARLTAVFSPAKMRCYGSQKL* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0457 475 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 33 470 - -
Ahy12g0457 475 SUPERFAMILY DNase I-like 44 288 IPR036691 -
Ahy12g0457 475 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 33 470 - -
Ahy12g0457 475 ProSiteProfiles EF-hand calcium-binding domain profile. 369 404 IPR002048 GO:0005509
Ahy12g0457 475 SUPERFAMILY EF-hand 350 400 IPR011992 -
Ahy12g0457 475 ProSitePatterns EF-hand calcium-binding domain. 382 394 IPR018247 -
Ahy12g0457 475 Gene3D Endonuclease/exonuclease/phosphatase 41 469 IPR036691 -
Ahy12g0457 475 Pfam Endonuclease/Exonuclease/phosphatase family 98 271 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0457 Ahy-Chr12 7162057 7166560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0457 126 469 EF-hand Containing Proteins AT1G02270 61.318 4.55e-157 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0457 - - gmx:100777138 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0457 12 7162057 7166560 Ahy12g0457 12 7162057 7166560 ECH
Ahy12g0457 12 7162057 7166560 Ahy2g0410 2 5701841 5706438 hybridization