Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0427 ATGTCTTTGTCTGCAACCAAGTTCGTGCACCCCATCACAGCTCCTCCCTCTACCAGATCCAGTGACAAGCCTCTCTTTTCCACTTTCTTTGGATCCAATCATACCAAGCTTCGCTTCAATAAACCTATTGTAGCTGCTCAACGCCGTTCTTCATCGGCAGCATCTACGTCTTCGCCTGTTGTTGCTGTCTCCGATGTTGTCAAGGAGAAGAAGCTCAAATCAGCCTCCAATCTGCTAATTACTAAAGAGGAAGGCTTGGTGCTCTATGAAGACATGATATTAGGTAGGTTCTTTGAAGATATGTGTGCCCAGATGTATTATAGGGGCAAGATGTTTGGTTTTGTTCACTTGTACAATGGCCAAGAAGCTGTGTCAACTGGATTCATCAAGTTTCTTAAGAAGGAAGATTATGTGGTGAGTACGTACAGGGACCATGTTCATGCCCTTAGTAAGGGGGTCCCGGCTCGTGAAGTGATGAGTGAACTCTTTGGGAAGGCAACGGGTTGCTGCCGAGGTCAGGGCGGTTCGATGCATATGTTCTCAAAACAGCACAATTTGCTCGGTGGGTTTGCGTTCATTGGTGAAGGAATTCCAGTGGCCACTGGGGCAGCCTTCTCCAGTAAGTACAGAAGGGAGGTGTTGAAAGAACCAGGTGCTGATGAGGTGACATTGGCATTTTTCGGAGATGGGACTTGTAACAATGGACAGTTCTATGAATGCCTTAACATGGCAGCTTTATGGAAATTGCCAATTGTGTTTGTGGTGGAAAACAATTTGTGGGCTATTGGTATGTCACACCTCAGGGCAACTTCTGATCCGCAGATATGGAAGAAGGGACCGGCGTTTGGAATGCCCGGGATCCATGTCGATGGGATGGATGTCTTGAAGGTCAGAGAGGTCGCAAAGGAGGCAATTGAAAGAGCTAGAAGAGGAGAGGGACCTACTTTAGTGGAATGTGAGACTTATAGATTTAGAGGACATTCGTTGGCTGATCCTGATGAGCTTCGTGACCCTGCTGAGAAGGCACACTATGCAGGCAGGGATCCCATCACAGCACTGAAGAAATATCTTTTTGACAACAAGTTAGCCTCTGAACAAGAATTGAAGGCCATAGACAAGAAAATCGAGGAGCTACTTGACGAAGCGGTCGAGTTTGCCGATGAGAGCCCTCTCCCTCCCCGCAGCCAGCTTCTGGAGAACGTATTTGCCGATCCAAAAGGTTTTGGAATTGGACCGGATGGAAAGTATAGATGCGAGGATCCAAAATTCACCCAAGGCACTGCTCATGTCTAA 1293 0.4733 MSLSATKFVHPITAPPSTRSSDKPLFSTFFGSNHTKLRFNKPIVAAQRRSSSAASTSSPVVAVSDVVKEKKLKSASNLLITKEEGLVLYEDMILGRFFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKFLKKEDYVVSTYRDHVHALSKGVPAREVMSELFGKATGCCRGQGGSMHMFSKQHNLLGGFAFIGEGIPVATGAAFSSKYRREVLKEPGADEVTLAFFGDGTCNNGQFYECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIWKKGPAFGMPGIHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKAHYAGRDPITALKKYLFDNKLASEQELKAIDKKIEELLDEAVEFADESPLPPRSQLLENVFADPKGFGIGPDGKYRCEDPKFTQGTAHV* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0427 430 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 78 405 IPR029061 -
Ahy12g0427 430 Gene3D - 41 412 - -
Ahy12g0427 430 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA 4 430 - -
Ahy12g0427 430 Coils Coil 361 388 - -
Ahy12g0427 430 Pfam Dehydrogenase E1 component 93 392 IPR001017 GO:0016624
Ahy12g0427 430 CDD TPP_E1_PDC_ADC_BCADC 88 386 - -
Ahy12g0427 430 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 83 403 IPR017597 GO:0004739|GO:0006086|GO:0043231
Ahy12g0427 430 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 4 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0427 Ahy-Chr12 6533339 6536099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0427 27 430 Acyl Lipid Metabolism Gene Families AT1G01090 80.941 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0427 K00161 - zju:107423789 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0427 12 6533339 6536099 Ahy12g0427 12 6533339 6536099 ECH
Ahy12g0427 12 6533339 6536099 Ahy2g0385 2 5201217 5203967 hybridization