Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0425 ATGGCAACAATGATGACTGCTTCAAGCAACTTAGTCTCAAGAAGTTCATCATATGTTTCCCATGGACCAATTTTCTCATGTGAGTCTAAAGTGTCACCCATGGAACTAAAGCACACCAACAATCATAATGGACTAAGAGTCTTGAACCAAGTGGATGAGATTCTGAACAGAACCCAAATTAAAGTTAGTGCAGCAAAATCAAAGAGGATGGGACTTCAAAGCAAGAGAGGTAAGCCTAAAGGTGTTATCATATGTGGAATGACTTTGATCTTTGTGGGAACTGAGGTTGCTCCTTGGAGCAAAACCGGCGGCTTAGGCGATGTAATCGGAGGTCTGCCACCAGCATTGGCAGCTAATGGACATCGAGTTATGACAATCACGCCGCGATATGATCAGTACAAAGATGCATGGGATACAAGTATTCAAGTTGAGGTAAAAGTAGGAGACAGAACAGAAAAGGTTCGGTTCTTCCATTGCTATAAAAGAGGAGTTGATCGTGTCTTCGTCGATCACCCTATGTTTCTTGAGAAGGTTTGGGGCAAAACCGGAACCAAAGTTTATGGACCTTATGCAGGGGAAGATTACCAAGACAATGAACTACGTTTTAGCTTGTTCTGCCAGGCAGCATTGGAAGCACCAAGGGTTCTGAATCTTAAGAGCAATAAATACTTTTCTGGGCCATATGGCGAAGATGTCATTTTTATCGCCAATGATTGGCACACGGCCCTTCTCGCTTGCTACCTGAAATCCATGTACCAATCAAGAGGCATCTATAAGAATGCAAAAGTCATTTTTTGTATCCACAACATTGCTTACCAAGGAAGATTCGCATTCGAAGACTTCTCGCTTCTCAATCTCCCTGACCAATTTAAAAGCTCATTTGACTTCATTGATGGACATGTTAAACCAGTAATAGGAAGGAAAATTAATTGGATGAAAGCTGCAATCATAGAATCATCCATGGTGTTAACTGTTAGTCCATACTATGCTAAAGAACTAGTCTCAGGTCCTGACAAAGGAGTTGAATTGGACAACATCCTTCGCCGAACCGGCATCATTGGAATTGTCAATGGCATGGATGTGCAGGAGTGGAATCCGTCCACCGATAAATATATTGCTGTCCGATACGACACTTCAACGGTGTTGGAAGCAAAATATATTTTGAAAGAAGCTCTCCAAGCTGAAGTTGGATTGCCAATAGATAGAAACATTCCTCTCATTGGATTCATTGGTAGGCTTGAAGAACAAAAAGGTTCTGATATTCTTGTAGCTGCTATTCCCCAATTGATTGAGGAGAATGTTCAGATAGTAGCCCTTGGAACAGGAAAGAAACAAATGGAGAAACAGCTTCAACAACTTGAAACATTATACCCAGACAAGGCCAGAGGAGTTGCAAAATTCAATGTTCCTTTAGCTCATATGATCATTGCTGGTGCTGATTTTCTATTGGTTCCTAGCAGATTTGAGCCTTGTGGTCTTATTCAACTACAAGCTATGCGCTATGGAACTGTACCTATTGTTGCCTCAACTGGTGGATTAGTTGACACAGTTCAAGAAGGTTTCACAGGATTTCAGATGGGTCCCTTCAATGTTGAGTGTGAAGCTGTGGATCCTTCGGATGTAGATGCAATTGCCAAGACCGTTAAAAGGGCTCTTGCGGTGTATGGGACTGGAGCTTTTACAGAAATGATCAAGAATTGCATGGCTCAAGATCTTTCATGGAAGGGTCCTGCTAAGAAGTGGGAGGAAGTACTTTTAAGTTTGGGAGTTCCTGGCAATGAACCTGGAATTGATGGAGAAGAAATTGCTCCACAAGCAAAGGAGAATGTTGCAGCTCCATAA 1842 0.4202 MATMMTASSNLVSRSSSYVSHGPIFSCESKVSPMELKHTNNHNGLRVLNQVDEILNRTQIKVSAAKSKRMGLQSKRGKPKGVIICGMTLIFVGTEVAPWSKTGGLGDVIGGLPPALAANGHRVMTITPRYDQYKDAWDTSIQVEVKVGDRTEKVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGTKVYGPYAGEDYQDNELRFSLFCQAALEAPRVLNLKSNKYFSGPYGEDVIFIANDWHTALLACYLKSMYQSRGIYKNAKVIFCIHNIAYQGRFAFEDFSLLNLPDQFKSSFDFIDGHVKPVIGRKINWMKAAIIESSMVLTVSPYYAKELVSGPDKGVELDNILRRTGIIGIVNGMDVQEWNPSTDKYIAVRYDTSTVLEAKYILKEALQAEVGLPIDRNIPLIGFIGRLEEQKGSDILVAAIPQLIEENVQIVALGTGKKQMEKQLQQLETLYPDKARGVAKFNVPLAHMIIAGADFLLVPSRFEPCGLIQLQAMRYGTVPIVASTGGLVDTVQEGFTGFQMGPFNVECEAVDPSDVDAIAKTVKRALAVYGTGAFTEMIKNCMAQDLSWKGPAKKWEEVLLSLGVPGNEPGIDGEEIAPQAKENVAAP* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0425 613 Hamap Glycogen synthase [glgA]. 87 588 IPR011835 GO:0004373
Ahy12g0425 613 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 7 613 - -
Ahy12g0425 613 CDD GT5_Glycogen_synthase_DULL1-like 90 587 - -
Ahy12g0425 613 Gene3D Glycogen Phosphorylase B; 90 579 - -
Ahy12g0425 613 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 87 586 IPR011835 GO:0004373
Ahy12g0425 613 Pfam Starch synthase catalytic domain 90 348 IPR013534 -
Ahy12g0425 613 Pfam Glycosyl transferases group 1 401 530 IPR001296 GO:0016757
Ahy12g0425 613 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 75 585 - -
Ahy12g0425 613 Gene3D Glycogen Phosphorylase B; 360 570 - -
Ahy12g0425 613 PANTHER GRANULE-BOUND STARCH SYNTHASE 7 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0425 Ahy-Chr12 6508204 6515151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0425 1 613 Glycosyltransferase AT1G32900 70.617 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0425 K13679 - gmx:100037476 1022.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0425 12 6508204 6515151 Ahy12g0425 12 6508204 6515151 ECH
Ahy12g0425 12 6508204 6515151 Ahy2g0382 2 5171744 5178362 hybridization