Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0423 ATGGGGAATTGTGTGTTCAAAGGGTTGCAAAATGGTGTATTGGAGGACATGAAGGTGAAAGTAGTGACTTCAAATGGTGGAATCATGGAGCTATACTCTCCCATCACAGTTGAATGCATAACAAACGAGTTTCCGGGCCATGGCATTTTTCGCAGGTATCATAACATGATATCAGAGCCTCTATCAAACGGCGAAGAACTCCATGGCGGCCAAATCTACTACCTCCTACCTCTAAACCCAACATTATTATCTTCATCAAGCAAAAGGGTACCTATAACCGAAACCAATAATCCCAACATAACACCATATAGAATGTCCACGTGTGAAAAGAACACAAACCCTAACCCTAACAATAACAAGAACACATGGTGGGAACCTCATGAGGTTCTTCCTAGGTACAACAACACGGGTGTGTGGAAGGTGAAGCTTGTAATAAGCCCCGAGAAGCTGTCGGAGATTCTTGCACAAGATTCTAGGACCGAGGCGTTGATTGAGAGTGTGAGGACGGTGGCAAAGTGCGGCAGCGGCGTTGCGCCGTCGTCGTCGATGACTAACTCCGATCAATGGAGCGTGTGTAGTAGCAGTTGTAAAGGTTCTACGTTTGGTGTGGATAGTTAA 618 0.4563 MGNCVFKGLQNGVLEDMKVKVVTSNGGIMELYSPITVECITNEFPGHGIFRRYHNMISEPLSNGEELHGGQIYYLLPLNPTLLSSSSKRVPITETNNPNITPYRMSTCEKNTNPNPNNNKNTWWEPHEVLPRYNNTGVWKVKLVISPEKLSEILAQDSRTEALIESVRTVAKCGSGVAPSSSMTNSDQWSVCSSSCKGSTFGVDS* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0423 205 PANTHER DUF4228 DOMAIN PROTEIN 1 194 - -
Ahy12g0423 205 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 194 - -
Ahy12g0423 205 Pfam PADRE domain 1 161 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0423 Ahy-Chr12 6496851 6497822 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0423 - - gmx:102665356 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0423 12 6496851 6497822 Ahy12g0423 12 6496851 6497822 ECH
Ahy12g0423 12 6496851 6497822 Ahy2g0380 2 5157188 5158076 hybridization