Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0419 ATGAAGCTTTCTGTTTCTTGTGCAATGATCTTAGCCACAACCACATTGGAGGCCCATTCCATTCACTTTGCCCCCTACTATTACGAGCTTGTCTCTCTCAGGAAATCGGTTAAATGGAAGCATTCCAGATGCTTTATCATTACTAACTCAATTATCAGGAAACCTTATAACAATGTCAAAGCATTATTCCGGCAAGGAAAGGCACATATGGCACTCCATAACATAGATGCTGCAGTTGAAAGCTTTAAAAATGCACTGGTCTTAGAGCCAAATGATGGTAGGCGAAAGGACAAAGTAATGGCATGCTTAGTTTATATAAATCAGGTTCAGGTCAACATGAAGTTTATTTGCGAAGTGGTGATATTATCATTTTCAATTATAGTAATACAATCGAGCATCACATTCTCACGAGAACTTGAAGGTCCAAATCATATCAAGACAACTACTTTTTATACCAAAACGTTCGTACTAGAACCAGGAAAGGTTAGCAGAAAAACTTTTTTCGATGTTGAGTTTCCAAGAGGCCACATTGGAATCAAGAATTTACAAGCCGAACTAGTTGATGAACACGGAAACTCGATACCACTGTATGAGGCTTACCTGCACCATTATTTTGTTTTAAGATATTTTGAAAATATCACCATGTCACAACATGCTAATGAAAATCAACCTAATTACGGTAAGTATTTTAAGAGAAATGATGGTGCATGTCAAACTTTCGTTAATTCAATTTCTTGGGGTCTTGGAGTTGACGCACGAAGAACTAGCACAGAACTACCAGATCCATTTAGAGTAGAAGTAGGTACGCATCCTGAGGATGTTCCAAAGGAGTATGATGAAGAGAAATGGTTAATCAATATTTTGGTCATTGACACACGTGGTGCAGAAGACAAGAAAGGTTGCTCCCAATGCAGATGTGACCTTTTAAACGTCAAAAGTGAAGATTTGAGAAACACAACAGGCGTTGATGGAACACCATTATCTAGTGATTATAAAGGAGGAATTTTTTGTTGCGAGAAGAAGTCTCAATGCAAATTACAACAGGGATACAATGAAAAACAAAAGAGAAAAGTTGCTATTAAATATACAATATCATGGGTTGAATGGGATCAACAGCAAGTGCCTCTTAAGTTTTATATTCTTGATGTTACTGATCAAGTCACATATAATGGATCCGAACCAATTCATCATTGCGCGGTAGAGTATTCTATAAATCCAGAAAAGACTGATGAAGGACATTACCATATTAAGAAAACAAATATTCCAATGAAAAAAGGTGGTAGTCTCATCTATATTACTGCTCATGTACATTCAGGAATTGTTAATGCAACATTATATGGAGAGGATGGAAGAAGATTATGTGAAATTAAGCCAATATATGGAACGGGAAAAGAGGCAGGCAATGAAGAAGGTTATGCTGTTGGAGCGTCTGGTTGCTATCCAAAACCGGATTCTATGAAGATTAAAGATGGTGAAAATTTAACTGCAGAATTTATACATGAAAACAAATATACCACTGGACTTATGGGGCATTTCTATGTCTATTTGGCAGAAGACTTACCAAAATCTTTGTAA 1575 0.3663 MKLSVSCAMILATTTLEAHSIHFAPYYYELVSLRKSVKWKHSRCFIITNSIIRKPYNNVKALFRQGKAHMALHNIDAAVESFKNALVLEPNDGRRKDKVMACLVYINQVQVNMKFICEVVILSFSIIVIQSSITFSRELEGPNHIKTTTFYTKTFVLEPGKVSRKTFFDVEFPRGHIGIKNLQAELVDEHGNSIPLYEAYLHHYFVLRYFENITMSQHANENQPNYGKYFKRNDGACQTFVNSISWGLGVDARRTSTELPDPFRVEVGTHPEDVPKEYDEEKWLINILVIDTRGAEDKKGCSQCRCDLLNVKSEDLRNTTGVDGTPLSSDYKGGIFCCEKKSQCKLQQGYNEKQKRKVAIKYTISWVEWDQQQVPLKFYILDVTDQVTYNGSEPIHHCAVEYSINPEKTDEGHYHIKKTNIPMKKGGSLIYITAHVHSGIVNATLYGEDGRRLCEIKPIYGTGKEAGNEEGYAVGASGCYPKPDSMKIKDGENLTAEFIHENKYTTGLMGHFYVYLAEDLPKSL* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0419 524 PANTHER STRESS UP-REGULATED NOD 19 PROTEIN 117 522 IPR011692 -
Ahy12g0419 524 SUPERFAMILY TPR-like 48 116 IPR011990 GO:0005515
Ahy12g0419 524 Pfam Stress up-regulated Nod 19 143 518 IPR011692 -
Ahy12g0419 524 Gene3D Tetratricopeptide repeat domain 35 112 IPR011990 GO:0005515
Ahy12g0419 524 ProSiteProfiles TPR repeat profile. 59 92 IPR019734 GO:0005515
Ahy12g0419 524 PANTHER STRESS UP-REGULATED NOD 19-RELATED 117 522 - -
Ahy12g0419 524 SMART tpr_5 59 92 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0419 Ahy-Chr12 6416578 6425613 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0419 - - aip:107626699 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0419 12 6416578 6425613 Ahy2g0379 2 5137034 5141108 hybridization