Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0350 ATGAAAATGGCAAACTTATTAGTCATCTCATTTATGCTTTGTCTAGGTATGTTATCTACTACTATCTACAATGTGAAACTCATTGCTTGTGCAAGTTCCAATGGAATATCAACAAGGTTCTATGATTTCAAGGTACAAACTAAAAGAGTTACCAAACTTTGTAACACCAAGGATATTGTCACAATCAATGGCAAGTTTCCAGGACCTGTAGTTTATGCACAAGAAGATGATAGAATCATAGTCAAAGTTACCAATAAGACACCCTTCAATATCACAATTCACTGGCATGGTATCCGGCAACAGTTATCGTGTTGGTACGATGGGCCGTCCTATATCACGCAGTGCCCGATTCAATCAGGACAAAGTTTCACCTATAATTTTACAGTGGCAAAGCAGAAGGGGACCTTCTTTTGGCATGCACATGTTTCTTGGCTAAGAGGCACAGCTTATGGTGCAATGGTTGTTTATCCTAAGGCCAATGTTCATTACCCTTTTAAGAATCCGTATCAAGAGCACATAATCTTATTAGGAGAATATTGGATAAAGGATCTCCAAGAAATTGAGCATTCAACTCTAGCAAGTGGAGGAGCTCCTCCTAGAGCAGATGCATTCACCATTAATGGTCATCCAGGCCCCAACTATAATTGCTCCACTAATGATGTCTATCAACTTGATGTGGTTCCTAGGAAGACATATTTGTTGAGGCTGATCAATGCTGGTTTAAACACTGAGAATTTCTTTGCCATTGCAAATCACAAACTAACAATTGTGGAAGCCGATGCTGAGTACACGAAGCCGTTCACCACGGACACGGTGATGTTAGGACCAGGCCAAACATTGAATGTCCTTGTCACTGCTGATCAACCCGTAGGGAAATACTCCATGGCTGTGGCGCCTTACAAATCAGGAAGGATTGTTCATTATCAAAACGTTTCAGCAATTGCTTGCTTCAACTATTTAGGAGCTGCATCTGATAGCTTATATTTGCCAGCTAAATTACCCAAACTCGACGACAAACTTGCCGTTAAGACAGTCATGGATGGATTAAGGAGCCTAAACCAAGTCGATGTCTTCAAAGAAATTGATAAAAACCTATTCATCACCATTGGATTGAATGTTCAAAAATGCCATTCAAAGACACCGAAGAAGAACTGCCAAGCCATGAATAATGGGGTGCTGGCAGCTTCGATGAACAACATAAGTTTTGTTAATCCGAATATTTCAATCCTGGAAGCATACTATAAGAATAAAAAAGGATCATATACCGAAGATTTTCCTGACAGACCATCTAAGTTCTACAACTTTGTCAATGGCGCACCTAATAACATTCCACATGACACACAGTCATTGAATGGGACTAGAACAAAGGTCCTTGAGTATGGTAGCAAGGTGCAACTCATTTTCCAGGACACTGGAACAGTAAACATTGAGAACCACCCAATGCATTTCCATGGCCACAGTTTCTATGTTGTAGGCTATGGTACAGGAAATTATAACCCTCAAACTGCGAAATTCAACTTAGTCGATCCTCCATACATGAGCACGATTGGAGTTCCGGTTGGTGGATGGGCAGCAATTCGCTTTGTCGCCAATAATCCAGGCGTCTGGTATATGCATTGCCACATTGATATACACCAATCATGGGGGCTAGGCATGGTATTTATAGTTTACAACGGAAAAGGGGAATCCGAGTCCCTACCTTCTCCTCCAGCGGACCTGCCACAATGTTAG 1731 0.4131 MKMANLLVISFMLCLGMLSTTIYNVKLIACASSNGISTRFYDFKVQTKRVTKLCNTKDIVTINGKFPGPVVYAQEDDRIIVKVTNKTPFNITIHWHGIRQQLSCWYDGPSYITQCPIQSGQSFTYNFTVAKQKGTFFWHAHVSWLRGTAYGAMVVYPKANVHYPFKNPYQEHIILLGEYWIKDLQEIEHSTLASGGAPPRADAFTINGHPGPNYNCSTNDVYQLDVVPRKTYLLRLINAGLNTENFFAIANHKLTIVEADAEYTKPFTTDTVMLGPGQTLNVLVTADQPVGKYSMAVAPYKSGRIVHYQNVSAIACFNYLGAASDSLYLPAKLPKLDDKLAVKTVMDGLRSLNQVDVFKEIDKNLFITIGLNVQKCHSKTPKKNCQAMNNGVLAASMNNISFVNPNISILEAYYKNKKGSYTEDFPDRPSKFYNFVNGAPNNIPHDTQSLNGTRTKVLEYGSKVQLIFQDTGTVNIENHPMHFHGHSFYVVGYGTGNYNPQTAKFNLVDPPYMSTIGVPVGGWAAIRFVANNPGVWYMHCHIDIHQSWGLGMVFIVYNGKGESESLPSPPADLPQC* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0350 576 CDD CuRO_3_LCC_plant 421 559 IPR034289 GO:0005507
Ahy12g0350 576 TIGRFAM laccase: laccase 38 576 IPR017761 GO:0046274|GO:0048046|GO:0052716
Ahy12g0350 576 SUPERFAMILY Cupredoxins 165 302 IPR008972 -
Ahy12g0350 576 ProSitePatterns Multicopper oxidases signature 2. 539 550 IPR002355 GO:0005507
Ahy12g0350 576 Gene3D - 25 157 IPR008972 -
Ahy12g0350 576 Gene3D - 169 354 IPR008972 -
Ahy12g0350 576 Pfam Multicopper oxidase 45 159 IPR011707 GO:0005507
Ahy12g0350 576 ProSitePatterns Multicopper oxidases signature 1. 534 554 IPR033138 -
Ahy12g0350 576 PANTHER MULTI-COPPER OXIDASE 21 576 IPR045087 -
Ahy12g0350 576 Pfam Multicopper oxidase 445 558 IPR011706 GO:0005507|GO:0016491
Ahy12g0350 576 CDD CuRO_2_LCC_plant 172 319 IPR034285 -
Ahy12g0350 576 CDD CuRO_1_LCC_plant 41 157 IPR034288 GO:0005507
Ahy12g0350 576 SUPERFAMILY Cupredoxins 359 576 IPR008972 -
Ahy12g0350 576 Gene3D - 374 576 IPR008972 -
Ahy12g0350 576 PANTHER LACCASE-6 21 576 - -
Ahy12g0350 576 Pfam Multicopper oxidase 171 321 IPR001117 -
Ahy12g0350 576 SUPERFAMILY Cupredoxins 38 180 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0350 Ahy-Chr12 5061927 5064911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0350 K05909 - gmx:100789406 1007.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0350 12 5061927 5064911 Ahy12g0350 12 5061927 5064911 ECH