Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0312 ATGGCAAGAGTGAAGCATATTCCAACACCTAGTCAAAAAGGTAAGAAAAAAGTAAGACCATCACAATCTCCATCGCCATCGCAAGCGTCTGGTAGCAGAAGGAGGGAAGATGGAGAAGAGGAGCAGGAACCAGAAGCAGGACGACGATCAGCACCTAAGAAAAGGCGTAATAAGCCAGGAACAGTAGCTCTTCGTGAGATTCGTAAATTTCAGAAGAGTTTCAACCTACTCATCCCAGCTGCCCCCTTCATGAGATGTGTCAAACAGATTACAAACCAACTATCTACGGAGGTCAATCGCTGGACAGCTGAAGCCATGGTAGCACTTCAAGAAGCAGCTGAGGATCATCTGGTTCGTTTGTTTGAAGATGGAATGTTGTGTGCTATCCATGCAAAGCGTGTTACTCTAATGAAAAAGGACATAGAGTTGGCCCGGAGACTCGGAGTGATAGGAAGACCTTGGTGA 465 0.4624 MARVKHIPTPSQKGKKKVRPSQSPSPSQASGSRRREDGEEEQEPEAGRRSAPKKRRNKPGTVALREIRKFQKSFNLLIPAAPFMRCVKQITNQLSTEVNRWTAEAMVALQEAAEDHLVRLFEDGMLCAIHAKRVTLMKKDIELARRLGVIGRPW* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0312 154 Pfam Core histone H2A/H2B/H3/H4 30 147 IPR007125 GO:0003677
Ahy12g0312 154 Gene3D Histone, subunit A 2 149 IPR009072 GO:0046982
Ahy12g0312 154 PANTHER HISTONE H3-LIKE CENTROMERIC PROTEIN HTR12 16 154 - -
Ahy12g0312 154 MobiDBLite consensus disorder prediction 1 63 - -
Ahy12g0312 154 SMART h35 49 152 IPR000164 GO:0000786|GO:0003677|GO:0030527
Ahy12g0312 154 MobiDBLite consensus disorder prediction 32 50 - -
Ahy12g0312 154 PANTHER HISTONE H3 16 154 IPR000164 GO:0000786|GO:0003677|GO:0030527
Ahy12g0312 154 MobiDBLite consensus disorder prediction 15 31 - -
Ahy12g0312 154 SUPERFAMILY Histone-fold 35 147 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0312 Ahy-Chr12 4458366 4461910 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0312 K11253 - gmx:100811872 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0312 12 4458366 4461910 Ahy12g0312 12 4458366 4461910 ECH