Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0289 ATGGCTTCGGAAGATGTGAAGAGCGGTGAATCTGCAGTCACAAAGATCGTTACTCTGGCTGAGGAAGCTAAGCTCGCTAGTCGTGAAGGCGTTGTCACCGCCGCCGCCGCTCCTTCCTACGCCTTCACCACCATCTGCAAGTCCCTTATCGCCGGTGGAGTCGCCGGAGGAGTATCACGAACAGCAGTTGCCCCACTGGAACGGTTGAAGATTTTGCTACAGGTCCAGAATCCTCATAACATTAAATACAATGGAACAGTCCAAGGCCTGAAATATATATGGAGAACTGAAGGTTTTCGTGGACTGTTCAAAGGGAATGGTACTAATTGTGCTCGGATTGTCCCTAACTCTGCAGTGAAGTTCTTCAGTTATGAGCAAGCTTCTAAGGGTATCCTGTATATGTATAGGCAGCAAACTGGAAATGAGGATGCTCAGCTGACTCCTGTTTTACGACTTGGAGCTGGAGCATGTGCTGGAATAATTGCCATGTCTGCAACTTATCCAATGGATATGGTTCGAGGCAGGATAACTGTACAGACTGAGAAATCCCCTTATCAGTATAGAGGAATGTTCCATGCTCTGTCTACCGTACTTAGGGAAGAAGGTCCACGTGCTTTATACAAGGGTTGGCTACCTTCAGTAATTGGAGTTATTCCTTATGTGGGTCTCAACTTTGCTGTCTACGAGTCTTTAAAAGATTGGTTAATCAAATCCAAACCGTTTGGTCTAGCTCAAGATTCTGAGTTGAGTGTGACAACACGTCTGGCTTGTGGTGCTGTTGCCGGAACTTTTGGACAAACTGTTGCTTATCCTCTCGACGTCATTCGTCGAAGAATGCAGATGGTGGGCTGGAACCATGCTGCTTCTGTTGTAGCTGGGGACGGAAGAGGCAAGGTCCCGCTCGAATACACTGGAATGATAGATGCATTTAGGAAAACCGTTCGGTACGAGGGATTTGGTGCATTATACAAGGGTCTGGTGCCAAATTCTGTAAAGGTGGTGCCGTCCATAGCAATCGCATTTGTAACGTACGAGGTGGTGAAGGACATTCTAGGAGTCGAGTTCCGAATATCAGACTGA 1080 0.4722 MASEDVKSGESAVTKIVTLAEEAKLASREGVVTAAAAPSYAFTTICKSLIAGGVAGGVSRTAVAPLERLKILLQVQNPHNIKYNGTVQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILYMYRQQTGNEDAQLTPVLRLGAGACAGIIAMSATYPMDMVRGRITVQTEKSPYQYRGMFHALSTVLREEGPRALYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKPFGLAQDSELSVTTRLACGAVAGTFGQTVAYPLDVIRRRMQMVGWNHAASVVAGDGRGKVPLEYTGMIDAFRKTVRYEGFGALYKGLVPNSVKVVPSIAIAFVTYEVVKDILGVEFRISD* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0289 359 Gene3D Mitochondrial carrier domain 41 353 IPR023395 -
Ahy12g0289 359 PANTHER BNAA09G39370D PROTEIN 1 354 - -
Ahy12g0289 359 SUPERFAMILY Mitochondrial carrier 45 346 IPR023395 -
Ahy12g0289 359 PRINTS Mitochondrial carrier protein signature 61 75 IPR002067 GO:0055085
Ahy12g0289 359 PRINTS Mitochondrial carrier protein signature 48 61 IPR002067 GO:0055085
Ahy12g0289 359 PRINTS Mitochondrial carrier protein signature 161 179 IPR002067 GO:0055085
Ahy12g0289 359 PRINTS Mitochondrial carrier protein signature 258 280 IPR002067 GO:0055085
Ahy12g0289 359 PRINTS Mitochondrial carrier protein signature 105 125 IPR002067 GO:0055085
Ahy12g0289 359 PRINTS Mitochondrial carrier protein signature 207 225 IPR002067 GO:0055085
Ahy12g0289 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 43 130 IPR018108 -
Ahy12g0289 359 PANTHER SOLUTE CARRIER FAMILY 25 1 354 - -
Ahy12g0289 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 146 234 IPR018108 -
Ahy12g0289 359 Pfam Mitochondrial carrier protein 146 238 IPR018108 -
Ahy12g0289 359 Pfam Mitochondrial carrier protein 248 351 IPR018108 -
Ahy12g0289 359 Pfam Mitochondrial carrier protein 45 130 IPR018108 -
Ahy12g0289 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 350 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0289 Ahy-Chr12 4096725 4100698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0289 49 354 EF-hand Containing Proteins AT5G51050 39.739 1.32e-67 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0289 K14684 - gmx:100814032 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0289 12 4096725 4100698 Ahy12g0289 12 4096725 4100698 ECH
Ahy12g0289 12 4096725 4100698 Ahy2g0314 2 3575018 3578999 hybridization
Ahy16g1199 16 21721609 21725641 Ahy12g0289 12 4096725 4100698 PCT
Ahy6g0218 6 2774302 2778289 Ahy12g0289 12 4096725 4100698 PCT
Ahy12g0289 12 4096725 4100698 Ahy16g1199 16 21721609 21725641 PCT
Ahy12g0289 12 4096725 4100698 Ahy6g0218 6 2774302 2778289 PCT