Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0269 ATGACTGCAAATGGTGGAACAGGAACTGAGGAACAACAACAACAACACAAGAGGAAGAAGGTGTTTGATTCTTTGCTCAAACCAAGTGTTCAAAAGTCACCAAGATTGTGCACAACTATTAGGGAAGGTTGGCCAGAAATCTTGCAAAATGAGTGTGTTATTGGTAATGATGATAACTTGAGTAGATGTGTTGCTTCTTTAGCTGGATCTGGACCTCCTAGTACTAGTTATTGTTCCATGACAGATTCTGCTCACATTAATGATGATTTAACTGTTAGAACTCATAATAAGAACCCTAATTTCTACCCTCAGAGGAATCAAGTAGCTATTGAGTCTAGGTATAGTAGCTTGAGTAGAGAAATTGTGCAACAAGATGAAGAGCAAATACCATTGAGACTAAGCAAAGGGGTTAAGGGAATTGATTCCGAATTTCGGGGCCTGAAATCATCACTGAGAGTTTCTGCAAATAGAAGCAATGTGGACAAGATCTTTACCTCGAGCAATGGCCTTGTTATTAATGGAACTACTCAGAATACTTCATCTGCATATAGTGTTTCTCATTTGATTGTGAAGCAAACCTTGAAGGGAAAGGGAGTTATTTGCAAGGACTTCGACGGAAGAATTGGTCCTGCCGGAGTAGTACTTATGAGGCAGGAGGAGGATGAGTCTCATCAATCTGATATGCCGAAACCAGATGCGACTGATAACACGCCTTCCCTGCAAGTAACTGTGAAGTCTGGCACAGGTTCCTCGAATGACGGGATGAACTTGAGAGAGTGGCTTAGGCCACAAGGTCATAAAATCGATAAATCAGGGAGGCTACAAATATTCAAGCAGATTCTGGAATTGGTTGATTTTGCACATTCCCAAGGTGTTGTCATGCTAAACTTAAGACCATCTTGTTTCACTCTATCACCTTCTTCGAGTAAAATCAAGTACATCGGTTCATCTGGCCAACAGGAGTTGCATAAATTATTGACTTGCAATGTGAACAAAAAAATGCCTCTAGAACAGGACGCCGGTGCGAGCCAAATCTTGAGAATGAAGCAGCAAAATCTCTATGAAGAGACAAGATCTCTTCGGCAGCATCATCATTTCACTTCCATTCATGGATGTAGGACTACAATGGCGAATCAAATTGGATCTACCGTAAATGAGTCCACCAAATTAGAAGAGAAGAAATGTATGTCTTTAACGCAATTAGAAGAGAAATGGTATACTAGTCCAGAAGAGCTAGATGGTGGGGTTTGCACATTTTCTTCAAATATTTATAGCCTTGGAGTTCTTCTATTTGAGTTGCTGTGCAATATTGAGTCATGGGAGTTGCATTCGGCCGTGATGTCAGATCTATGTCATAGAATCTTACCACCAAGATTTCTATCAGAAAATCCAAAGGAAGCTGGCTTTTGTCTTTGGCATCTTCATCCTGATCCGTCTTCTCGCCCCAATACCAGGATGATTTTAGAGTCTCAGTTTATAGTCGAATCAGAGAAATCAAATTCTGCAGATGATGTTCTGCCGGTTGGAGTATCAGATGATGATGAAGCTGAAACACAGCAATTACTACATTTTCTAGTCTCACTTCAAGAAGAAAAGAAAAAACAGGAATCAAAGTTGGTAGAAGAGCTAAGTTGGTTGGATGAAGACATTAAGTTGGTAGAAAGAAGTAATTCGCACGAGACAGATTCGAGGTTTCCTTTGAAACAAGTGAACTATGCTGAATTGATAGGAAGCAGTTATCATTTTCCAGAACATGCCATTTCAAGTGCTAATGAGGCAAGATTCTTGAGTAACATAAATCAGCTAGAGAGTTCTTATTTTTCAATGAGATGCCAAATGCTACTCAAAGAGGTTTCAACCGTTGCAAACTATGATAAAGATGTGATTGAAAGTAGAGATAGATTGCATCATACAGAGAATGTTACTAAGGAGCCCAATAGAATTCAGAGTTCTGCTGGTTCTTTAGGAACCTTCTTTGAAGGTTTATGCAAGTTTGCTCGTTACAGCAAGTTTGAAGAACGCGGCACACTGAGAAACCGAGATCTGCTTAGCTCTGCCAATGTGATATGTGCTTTGAGTTTTGACCGCGACGAGGATTACATCGCAGCAGCCGGAGTTTCAAAGAAGATCAAGGTTTTTGACTTGAGTAGTATTATGAGTGGTTCTGTTGACATCCAGTACCCTGTAGTCGAGATGTCGAATAAATCAAAGCTTAGCTGTGTGTGCTGGAACAGCTATATTAAAAATCATCTGGCTTCTACTGATTATGATGGTGTTGTTCAGATGTGGGATGCAGGCACTGGTCAGCCATTGTCTCAATACATGGAGCACCAAAAGAGAGCTTGGTCTGTTCATTTTTCTCTGTCAGATCCAAAAATGTTTGCTAGTGGAAGTGATGACTGCTCTGTCAAACTCTGGAATATCGGCGAGAGAAACTCTGTAGGAACCATATGGAACCCTGCCAATGTATGCTGTGTTCAGTTCTCCAGTTTCTCAACACACCTTTTGTTCTTTGGTTCAGCTGATTACAAGGTCTACGGTTACGATCTTCGCCACACTCGAGTCCCTTGGTGCACCTTAGGTGGTCATGGAAAAGCTGTTAGCTATGTAAAATCTGTAGATGCTGAAACAGTTGTTTCTGCTTCCACTGACAACTCTTTGAAGCTATGGGACCTGAAGAAAGCTAGTTCTTCTGGTTTGTCATCTGATGCTTGTGCCTTAACCTTCAAAGGTCATAGTAATGAAAAGAATTTTGTAGGTTTATCTGTTTCAGATGGATATATTGCATGCGGTTCGGAAACTAATGAGGTATATTGTTATCACAAGTCACTGCCATTGCCAATCACTTCTCACAAATTCGAATCTATCGATCCGGTTTCTGGTCATTCGACTAGTGATGACAATAATGGACAGTTTGTTTCTAGTGTCTGCTGGAAAAAGAAATCTAATATGCTTGTTGCCGCCAATTCGATCGGAATTGTGAAACTGCTACAGATGGTTTGA 3003 0.4059 MTANGGTGTEEQQQQHKRKKVFDSLLKPSVQKSPRLCTTIREGWPEILQNECVIGNDDNLSRCVASLAGSGPPSTSYCSMTDSAHINDDLTVRTHNKNPNFYPQRNQVAIESRYSSLSREIVQQDEEQIPLRLSKGVKGIDSEFRGLKSSLRVSANRSNVDKIFTSSNGLVINGTTQNTSSAYSVSHLIVKQTLKGKGVICKDFDGRIGPAGVVLMRQEEDESHQSDMPKPDATDNTPSLQVTVKSGTGSSNDGMNLREWLRPQGHKIDKSGRLQIFKQILELVDFAHSQGVVMLNLRPSCFTLSPSSSKIKYIGSSGQQELHKLLTCNVNKKMPLEQDAGASQILRMKQQNLYEETRSLRQHHHFTSIHGCRTTMANQIGSTVNESTKLEEKKCMSLTQLEEKWYTSPEELDGGVCTFSSNIYSLGVLLFELLCNIESWELHSAVMSDLCHRILPPRFLSENPKEAGFCLWHLHPDPSSRPNTRMILESQFIVESEKSNSADDVLPVGVSDDDEAETQQLLHFLVSLQEEKKKQESKLVEELSWLDEDIKLVERSNSHETDSRFPLKQVNYAELIGSSYHFPEHAISSANEARFLSNINQLESSYFSMRCQMLLKEVSTVANYDKDVIESRDRLHHTENVTKEPNRIQSSAGSLGTFFEGLCKFARYSKFEERGTLRNRDLLSSANVICALSFDRDEDYIAAAGVSKKIKVFDLSSIMSGSVDIQYPVVEMSNKSKLSCVCWNSYIKNHLASTDYDGVVQMWDAGTGQPLSQYMEHQKRAWSVHFSLSDPKMFASGSDDCSVKLWNIGERNSVGTIWNPANVCCVQFSSFSTHLLFFGSADYKVYGYDLRHTRVPWCTLGGHGKAVSYVKSVDAETVVSASTDNSLKLWDLKKASSSGLSSDACALTFKGHSNEKNFVGLSVSDGYIACGSETNEVYCYHKSLPLPITSHKFESIDPVSGHSTSDDNNGQFVSSVCWKKKSNMLVAANSIGIVKLLQMV* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0269 1000 Gene3D Transferase(Phosphotransferase) domain 1 253 504 - -
Ahy12g0269 1000 Pfam WD domain, G-beta repeat 859 891 IPR001680 GO:0005515
Ahy12g0269 1000 Pfam WD domain, G-beta repeat 769 807 IPR001680 GO:0005515
Ahy12g0269 1000 PANTHER LIGASE COP1, PUTATIVE-RELATED 2 1000 - -
Ahy12g0269 1000 ProSitePatterns Trp-Asp (WD) repeats signature. 878 892 IPR019775 -
Ahy12g0269 1000 PRINTS G protein beta WD-40 repeat signature 878 892 IPR020472 -
Ahy12g0269 1000 PRINTS G protein beta WD-40 repeat signature 751 765 IPR020472 -
Ahy12g0269 1000 PRINTS G protein beta WD-40 repeat signature 794 808 IPR020472 -
Ahy12g0269 1000 MobiDBLite consensus disorder prediction 219 238 - -
Ahy12g0269 1000 ProSiteProfiles Trp-Asp (WD) repeats profile. 860 900 IPR001680 GO:0005515
Ahy12g0269 1000 PANTHER PROTEIN SPA1-RELATED 2 2 1000 IPR044630 GO:0009640
Ahy12g0269 1000 SUPERFAMILY WD40 repeat-like 686 995 IPR036322 GO:0005515
Ahy12g0269 1000 ProSiteProfiles Protein kinase domain profile. 157 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0269 1000 MobiDBLite consensus disorder prediction 1 24 - -
Ahy12g0269 1000 Gene3D - 658 1000 IPR015943 GO:0005515
Ahy12g0269 1000 ProSiteProfiles Trp-Asp (WD) repeats profile. 774 816 IPR001680 GO:0005515
Ahy12g0269 1000 SMART serkin_6 183 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0269 1000 SUPERFAMILY Protein kinase-like (PK-like) 253 492 IPR011009 -
Ahy12g0269 1000 SMART WD40_4 810 849 IPR001680 GO:0005515
Ahy12g0269 1000 SMART WD40_4 952 998 IPR001680 GO:0005515
Ahy12g0269 1000 SMART WD40_4 725 764 IPR001680 GO:0005515
Ahy12g0269 1000 SMART WD40_4 853 891 IPR001680 GO:0005515
Ahy12g0269 1000 SMART WD40_4 902 941 IPR001680 GO:0005515
Ahy12g0269 1000 SMART WD40_4 679 714 IPR001680 GO:0005515
Ahy12g0269 1000 SMART WD40_4 767 807 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0269 Ahy-Chr12 3938811 3944829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0269 771 940 Miscellaneous Gene Families AT5G08390 24.561 1.97e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0269 K16240 - gmx:100802144 1288.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0269 12 3938811 3944829 Ahy2g0304 2 3456849 3463173 hybridization