Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0262 ATGCCGACCTCTTCATCTCCGCCGAAGTCCACGGCGGAGCACGGCACCGGCGGCGGAGCCGGAGGAGGAGGATTATACGAAGAGGAAGGATGGGTTTGGGCGCAGATCAAAGCGGAGGCGCGTCGCGACGCCGAATCGGAGCCGGCGCTGGCGAGCTACCTTTATTCAACGATTCTCTCTCACTCTTCGTTGGAGCGTTCGATTTCGTTCCATTTAGGGAACAAGCTTTGTTCTTCGACGCTACTTTCGACGCTGCTCTATGACCTTTTCCTCAACGCGTTTTCCTCCGATTGTGCACTGCTCTCCGCCACCGTCGCCGACCTTCGTGCCGCAAGGGAGCGGGATCCGGCGTGTGTGTCGTACTCTCACTGCTTGCTCAATTATAAAGGTTTCCTTGCATGCCAGGCTCACCGTGTGGCACACCGACTGTGGCAGCAGTCACGGCGGCCATTGGCCCTAGCACTGCAGTCTCGGATAGCTGATGTCTTTGCCGTGGACATTCACCCTGCGGCGAGGATTGGGAAGGGGATTCTGTTTGATCATGCGACCGGCGTGGTGGTTGGAGAGACTGCAGTGATTGGCAACAATGTCTCCATTCTGCACCATGTGACCCTAGGTGGTACCGGTAAGATTGGTGGGGACAGGCACCCCAAGATTGGTGATGGTGTGCTGATTGGTGCCGGTGCCACAATTCTTGGCAACGTGAAGATTGGTGAAGGTGCTAAGATTGGTGCCGGGAGCGTTGTTTTAATTGACGTGCCACCACGGACTACCGCGGTTGGGAACCCAGCGAGGTTGGTGGGTGGGAAGGAGAAGCCTTCTAAGCATGAGGATGTCCCCGGGGAGTCAATGGACCATACGTCCTTCATCTCTGAATGGTCAGATTATATTATTTGA 897 0.5608 MPTSSSPPKSTAEHGTGGGAGGGGLYEEEGWVWAQIKAEARRDAESEPALASYLYSTILSHSSLERSISFHLGNKLCSSTLLSTLLYDLFLNAFSSDCALLSATVADLRAARERDPACVSYSHCLLNYKGFLACQAHRVAHRLWQQSRRPLALALQSRIADVFAVDIHPAARIGKGILFDHATGVVVGETAVIGNNVSILHHVTLGGTGKIGGDRHPKIGDGVLIGAGATILGNVKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKEKPSKHEDVPGESMDHTSFISEWSDYII* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0262 298 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 225 253 IPR018357 GO:0016740
Ahy12g0262 298 Gene3D Hexapeptide repeat proteins 166 287 - -
Ahy12g0262 298 MobiDBLite consensus disorder prediction 263 285 - -
Ahy12g0262 298 Pfam Serine acetyltransferase, N-terminal 32 136 IPR010493 GO:0005737|GO:0006535|GO:0009001
Ahy12g0262 298 Pfam Hexapeptide repeat of succinyl-transferase 183 199 IPR001451 -
Ahy12g0262 298 PANTHER SERINE ACETYLTRANSFERASE 27 298 - -
Ahy12g0262 298 MobiDBLite consensus disorder prediction 1 24 - -
Ahy12g0262 298 SMART SATase_N_2_a 32 136 IPR010493 GO:0005737|GO:0006535|GO:0009001
Ahy12g0262 298 CDD LbH_SAT 163 263 IPR045304 -
Ahy12g0262 298 SUPERFAMILY Trimeric LpxA-like enzymes 31 268 IPR011004 -
Ahy12g0262 298 TIGRFAM cysE: serine O-acetyltransferase 106 265 IPR005881 GO:0005737|GO:0006535|GO:0009001
Ahy12g0262 298 MobiDBLite consensus disorder prediction 269 283 - -
Ahy12g0262 298 Gene3D serine acetyltransferase, domain 1 25 165 IPR042122 -
Ahy12g0262 298 Pfam Bacterial transferase hexapeptide (six repeats) 216 249 IPR001451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0262 Ahy-Chr12 3843003 3845590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0262 32 286 Miscellaneous Gene Families AT2G17640 56.078 1.80e-91 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0262 K00640 - gmx:547632 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0262 12 3843003 3845590 Ahy2g0294 2 3342942 3345592 hybridization