Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0197 ATGTCCGCTAACTCTATTTCCTCTTGCTCCTCTCTCCGATTCCTCACAACTCGAACAATCCCCAAAACCCCATTTCTCAAAACCCCATCTTTCATCCAAATACCCAGAAAAAACAACGACCACACCTTCTTCTCATTCAGACCCATAACCTTCCAGAAGCTTCCAACAACACCATCATCATCATCATCAACAACACCGTCACCATCAACTACCGAAGAAAATTCCCTTCAACCCATTGAAGAGCTTCCCCCAAAGCTTCAAGAAATTGTGAAGCTCTTCCAATCCGTTGAGGAACCAAAAGCCAAGTACGAGCAGCTACTCTTCTATGGCAAGAGCCTCAAACCCCTCGAACAGCAATTCAAAACCAACGACAACAAGGTCCAAGGTTGTGTCTCCCAGGTTTGGGTCCGAGCCTACCTCGACCCTCAACAAAACAACAACGTTGTTGTCTACGAAGCTGACTCTGACTCGCTCCTCACAAAGGGTCTCGCCGCTTTGCTTGTAACCGGGTTCTCGGGTCGACCCGTTAGCGAGATTGTTCGAGTCAAACCCGATTTTGTTCACCTTCTTGGGTTACAGCAGAGTTTGACACCTTCGAGGAATAATGGGTTCTTGAATATGCTCAAGTTGATGCAGAAGAAAGCACTGATGCTCTTTGTTGAAGCTGAAAAGGGTGCTTCTGAATTGGGTTCAAGTTCAAGTTCGAGTTTGGAAGTTAAAGATGGTAACTTTGTTGAGAATTCAAAGGGTTCTGGGGCTGGTGGTGAATCAGTGTCACAAAGTTCAGGTGAAAAAGGTGCTGAATTCACCTCAAGTTCTGAGGTCAAAGGTGGAAGCTTTGTTGAGAATTCAAGTGGTGGTGAATTGAGTGGTAGGGGGAGGAGGATAAAGGAGAAGCTTGAGAAGGAGCTTGATCCTGTTGAATTGGAAGTTGAAGATGTTTCATATCAGCATGCTGGGCATGCTGGTGTTAGAGGGAGTGGTGATGGAGAAACACATTTCAATCTTAGGGTTGTGTCTAAGGAGTTTGAAGGGAAGAGTTTGGTTAAGAGGCACAGGCTTATCTATAAGCTCTTGGATGATGAGTTGCAGTCTGGGCTTCATGCATTGTCCATTGTAGCAAAGACACCTTCTGAAGTCAATGAAGGATAA 1152 0.454 MSANSISSCSSLRFLTTRTIPKTPFLKTPSFIQIPRKNNDHTFFSFRPITFQKLPTTPSSSSSTTPSPSTTEENSLQPIEELPPKLQEIVKLFQSVEEPKAKYEQLLFYGKSLKPLEQQFKTNDNKVQGCVSQVWVRAYLDPQQNNNVVVYEADSDSLLTKGLAALLVTGFSGRPVSEIVRVKPDFVHLLGLQQSLTPSRNNGFLNMLKLMQKKALMLFVEAEKGASELGSSSSSSLEVKDGNFVENSKGSGAGGESVSQSSGEKGAEFTSSSEVKGGSFVENSSGGELSGRGRRIKEKLEKELDPVELEVEDVSYQHAGHAGVRGSGDGETHFNLRVVSKEFEGKSLVKRHRLIYKLLDDELQSGLHALSIVAKTPSEVNEG* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0197 383 Pfam Fe-S metabolism associated domain 91 213 IPR003808 -
Ahy12g0197 383 MobiDBLite consensus disorder prediction 250 286 - -
Ahy12g0197 383 MobiDBLite consensus disorder prediction 229 294 - -
Ahy12g0197 383 SUPERFAMILY SufE/NifU 81 216 - -
Ahy12g0197 383 PANTHER - 34 381 - -
Ahy12g0197 383 MobiDBLite consensus disorder prediction 54 77 - -
Ahy12g0197 383 Gene3D - 291 382 IPR036065 -
Ahy12g0197 383 MobiDBLite consensus disorder prediction 54 79 - -
Ahy12g0197 383 Gene3D - 82 225 - -
Ahy12g0197 383 PANTHER SUFE-LIKE PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL 34 381 - -
Ahy12g0197 383 SUPERFAMILY BolA-like 294 382 IPR036065 -
Ahy12g0197 383 Pfam BolA-like protein 300 379 IPR002634 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0197 Ahy-Chr12 3167890 3171011 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0197 K22066 - gmx:100779254 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0197 12 3167890 3171011 Ahy2g0228 2 2573405 2576564 hybridization