Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0190 ATGGCAGAAATTGATCAAGTTAGACCCTTAGCCCCATCAAGAGACCAACAAAGTAGTAGTGATGATGAAGAAGCTCTCATCAAAACCAAACATCTTAGGAGAATCAAATTATGTGGATGTGTAAGTGCAATTTCTTTCTTAATATTTGTAATAGTAAGTGTGATTTTATCATTCACAGTTTTTAAGGCCAAAGATCCCATAGTTACAACTAATAATATCACACTCACAAACCTAGACTTTAGTGTAAATGTAAATCCAATGACTCCTAGTGTAAAGGTTAATATGTCTCTTTTAATAGACATGTCTATTAAGAATCCTAATTCAGCATCCTTCAAATTTCGTAATGCAACCACGGCCATCAGCTACCGTGGGGTGGCCGTGGCCGAGGTGAAGAATCCGCCGGGGATTGCTAAGGCCAGACGGACATTTAGGATGAATGTCACGGCGGATGTGTTGGCCGACCGGCTCGCTACTAGGCCGGAATTGTTTTCGGATGTTATGTCTGGACACATGACCTTAAACACCTACACAGAGATTTCAGGGCGTGTTAAGGTTTTGGTAATTAAGAAACATGCTGAGATTAAGATGAATTGCACTGTGAATGTTGATTTTTCAAGTAAGCAAGTTCAGGACATGAATTGCAAACGTAAGGTGAAAATTTAG 663 0.3967 MAEIDQVRPLAPSRDQQSSSDDEEALIKTKHLRRIKLCGCVSAISFLIFVIVSVILSFTVFKAKDPIVTTNNITLTNLDFSVNVNPMTPSVKVNMSLLIDMSIKNPNSASFKFRNATTAISYRGVAVAEVKNPPGIAKARRTFRMNVTADVLADRLATRPELFSDVMSGHMTLNTYTEISGRVKVLVIKKHAEIKMNCTVNVDFSSKQVQDMNCKRKVKI* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0190 220 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 19 219 - -
Ahy12g0190 220 Gene3D - 50 208 - -
Ahy12g0190 220 MobiDBLite consensus disorder prediction 1 22 - -
Ahy12g0190 220 Pfam Late embryogenesis abundant protein 102 199 IPR004864 -
Ahy12g0190 220 SUPERFAMILY LEA14-like 63 154 - -
Ahy12g0190 220 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 19 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0190 Ahy-Chr12 3126809 3127745 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0190 - - adu:107472891 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0190 12 3126809 3127745 Ahy2g0218 2 2504489 2505440 hybridization