Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0175 ATGAAGAAGTTGGTCCTCAAATTAGACTTGCATGATGACAAGGACAAACAAAAAGCTTTGAAAACAGTGTCAACACTTTCAGGTATTGATGCAATCTCAATGGACATGAAAGAGAAGAAATTAACAGTTATAGGGACAGTGGATCCAATAACTGTTGTAAGCAAATTGAGGAAGCATTGGCAAACAGATCTTGTGGTGGTTGGACCAGCCAAGGAGCCAGAGAAGAAAGATGATGGAAAGAAAGATGAAGGAAAAAAAGATGGAGAAAAAAAAGAAGAGGGAAAGAAAGATGGAGAAAAGAAAGAAGAAGAAAAGAAAGATGATAAGAAGAAAGATCAAGCACCACTTGACCCTGCTGCTGTTATGGAGATGGTTAAGGCTCAACAAAGGGCTTATTATTATTATAATAATCCCTACATGACAACACAATATCATACTCAAAGCATTGAAGAGAATCCCAATGCTTGTGTCATTTCTTAA 480 0.3688 MKKLVLKLDLHDDKDKQKALKTVSTLSGIDAISMDMKEKKLTVIGTVDPITVVSKLRKHWQTDLVVVGPAKEPEKKDDGKKDEGKKDGEKKEEGKKDGEKKEEEKKDDKKKDQAPLDPAAVMEMVKAQQRAYYYYNNPYMTTQYHTQSIEENPNACVIS* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0175 159 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 158 - -
Ahy12g0175 159 MobiDBLite consensus disorder prediction 63 120 - -
Ahy12g0175 159 Pfam Heavy-metal-associated domain 9 58 IPR006121 GO:0046872
Ahy12g0175 159 MobiDBLite consensus disorder prediction 69 116 - -
Ahy12g0175 159 Gene3D - 1 72 - -
Ahy12g0175 159 SUPERFAMILY HMA, heavy metal-associated domain 2 58 IPR036163 GO:0046872
Ahy12g0175 159 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0175 Ahy-Chr12 2981510 2983980 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0175 - - gmx:100819572 141.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0175 12 2981510 2983980 Ahy2g0205 2 2376447 2379126 hybridization
Ahy14g2534 14 132106249 132109462 Ahy12g0175 12 2981510 2983980 PCT
Ahy4g2226 4 118397241 118400447 Ahy12g0175 12 2981510 2983980 PCT
Ahy12g0175 12 2981510 2983980 Ahy14g2534 14 132106249 132109462 PCT
Ahy12g0175 12 2981510 2983980 Ahy4g2226 4 118397241 118400447 PCT