Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0123 ATGTCTATCATGAAGAACAATCACAAAGATCTAGAACACATATATTCTTCATGGAACTTCTCAAAGCTAATGGCTTTCATTCTTCTCTTGATCACAATCTCTTACCTTTGTTACTCTCTTAGATTTGTTACCAATTCATATGACTGTAGCCAAACACACCACATTTCAATTAGCCACATTTCTGACACCACCACCACCACTACCACCACTTCCACCACAGCAGCAGCAACAAATTCACACTCTCAAGAAGAAGAAGAAGATGCAGCAATTGTTTCCACAAAGTTGGAACCTTTTGAAGAAACAAATATTTCCCACATAGTGTTTGGGATTGGAGCCTCAGCAAAGCTTTGGAAGCAAAGAAAAGAGTACATAAAGCTATGGTGGAAGCCAAATCAGATGAGAGGAATAGTGTGGCTAGAAGAGAAAGTGAAAACTGATCCAAGTGATGAGAAACTCTTGCCACAGTTGAAGATCTCTGAAGACACTTCAAGGTTCAATTACAAGAATCCAAAGGGTCATAGATCAGCCATAAGGATCTCAAGGATTGTTTCAGAGACACTAAGGCTTGGATTGAAGAATGTGAGGTGGTTTGTGATGGGAGATGATGACACAGTTTTTGTTACTGAGAATTTGGTGAAAGTGTTGCAGAAATATGATCACAATCAGTATTATTACATTGGAAGTAACTCAGAGAGTCATCTGCAGAACATTTATTTCTCTTATAACATGGCTTATGGTGGTGGTGGTTTTGCAATTAGTTACCCTTTGGCTTTGGCATTGGAGAAGATTCAAGATAGGTGTATTCAGAGGTACCCTGGTTTGTATGGTTCTGATGATAGGATTCAAGCTTGTATGGCTGAGCTTGGTGTTCCTCTCACCAAAGAAAGAGGCTTTCATCAGTTTGATGTGTACGGCAATCTATTTGGGCTTTTAGCGGCCCATCCTGTTACTCCACTTGTGTCCCTCCATCATTTGGACATAGTCGAGCCCATTTTTCCAAACGTGAGCCGAGTCCAAGCCCTAAAGCGGCTCAAGGTGCCCATGCAACTCGACCCGGCTGGGCTCATGCAGCAATCCATTTGCTACGACAAGACCCGGACTTGGACCATATCCGTTTCATGGGGCTATGCGGTTCAAATTTTCCGGGGCATTTTTTCGGCCCGGGAGATGGAAATGCCGGCGAGAACCTTCTTGAATTGGTACAAGCGGGCCGATTACACAGCCTATCCGTTCAATACCCGCCCGGTTAGCCGGAATGTCTGCCAAAAACCATTTGTTTACTACTTGTCCAATGCAGCATACAACAAGGGTGCTAATGAGACTGCGAGCCGGTACGTTCGGACTCAGTCCAACCCGGCTTGCAAGTGGAAAATGGAGGATCCGACCCGAATCAAAATAATTGAGGTTTATAAGAAACCCGACCCACATTTGTGGGACAAGTCTCCAAGAAGGAATTGTTGCAGGGTAAGACAAACAAAGAAGAAAGGAACTTTGGTGATTCATGTTGGTGAATGCATTGAAGATGAAATTGTTGAGTTATAG 1542 0.4326 MSIMKNNHKDLEHIYSSWNFSKLMAFILLLITISYLCYSLRFVTNSYDCSQTHHISISHISDTTTTTTTTSTTAAATNSHSQEEEEDAAIVSTKLEPFEETNISHIVFGIGASAKLWKQRKEYIKLWWKPNQMRGIVWLEEKVKTDPSDEKLLPQLKISEDTSRFNYKNPKGHRSAIRISRIVSETLRLGLKNVRWFVMGDDDTVFVTENLVKVLQKYDHNQYYYIGSNSESHLQNIYFSYNMAYGGGGFAISYPLALALEKIQDRCIQRYPGLYGSDDRIQACMAELGVPLTKERGFHQFDVYGNLFGLLAAHPVTPLVSLHHLDIVEPIFPNVSRVQALKRLKVPMQLDPAGLMQQSICYDKTRTWTISVSWGYAVQIFRGIFSAREMEMPARTFLNWYKRADYTAYPFNTRPVSRNVCQKPFVYYLSNAAYNKGANETASRYVRTQSNPACKWKMEDPTRIKIIEVYKKPDPHLWDKSPRRNCCRVRQTKKKGTLVIHVGECIEDEIVEL* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0123 513 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 1 511 - -
Ahy12g0123 513 PANTHER FRINGE-RELATED 1 511 - -
Ahy12g0123 513 Gene3D - 95 352 - -
Ahy12g0123 513 Pfam Protein of unknown function, DUF604 235 487 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0123 Ahy-Chr12 2513488 2519922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0123 22 513 Glycosyltransferase AT4G23490 65.191 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0123 - - gmx:100789583 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0123 12 2513488 2519922 Ahy2g0162 2 1913955 1920353 hybridization
Ahy14g2515 14 130835601 130841074 Ahy12g0123 12 2513488 2519922 PCT
Ahy4g2211 4 117920428 117925604 Ahy12g0123 12 2513488 2519922 PCT
Ahy12g0123 12 2513488 2519922 Ahy14g2515 14 130835601 130841074 PCT
Ahy12g0123 12 2513488 2519922 Ahy4g2211 4 117920428 117925604 PCT