Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0096 ATGGGAGATCAAGAAATACTGAAAAGGTCACCATCTCAAGTAAAATATGACATGATTCTATATGCAATAAGGCTGGTGGTGCTGGTTGTTCTTCTTGGTTGGATTTTCATTTGGATAATGATGCCTACAAGTACTTTCAGACAAACATGGCTACCTCATCTCAGAGCAAAGACAACTACCTCAACCTATTTTGGTTCACAGGGTACAACACTTTTGATTTATACTTTTCCAGTATTGTTCATAGCTTCTCTTGGGTGTATCTACCTCCATATAGTCAAAAAAGCAAATGATTCCAACATGGATAGATGTGACAATAGGAATGATGATAAAGGAGGTAAGGAAACAATATGGAAGCGTCCATTTATTGTAAAAGGGCCTCTTGGAATTGTTTCTGGAACAGAGGTAGCAATGTTGTTAATGTTTATTGGACTCCTACTTTGGTCCTTTGCTTCTTACTTGCACAACTTCTTTGCTCTAATCACACAAAAATCAGCAGCACAATTTGGTGTAAAACTATGGGAATTGAAACTGGAGGACGCAGGACTAATATTGGGTTTGGTTGGTAACATATGCTTGGCATTCTTGTTCTTTCCTGTGTCACGTGCCTCCCCCGTGCTTCCACTTCTTGGCCTCACCTCTGAGAGTTGCATTAAATACCATATATGGCTTGGACATTTGGTTCTCACTTTCTTCACAGCCCATGGCGTTTCCTACATCATTTTTTGGGCTGCCACCAACCAAATTTCTCAGATGGTGAAATGGGAGAAAATTGGGATATCAAATGTGGCCGGAGAGATTTCATTGGTATGTGGTTTGATCCTATGGATTGCAACAATTCCTGGCATTAGAAGAAAATTCTTTGAGCTTTTCTTCTATGCTCACTACCTCTACATATTCTTCATGCTCTTCTTCATCTTCCATGTTGGAATTTCCTATGCAAGCATCATGCTCCCTGGTTTCTACATCTTCATGGTTGATCGTTTCCTAAGGTTTCTTCAGTCAAGAACCCATGTTCATTTGGTTTCTGCTCGTGTCTTGCCTTGTGATACCATAGAACTCAACTTCTCTAAAACCCTTGAGTTAAGTTACACTCCCACAAGTGTTATGTTCATAAATATACGAAGCATATCAAAGCTACAATGGCATCCATTCACCATTACTTCAAGTAGCAAATTGGAGCCAGAAAAGCTTAGTGTTGTTATTAAGAGTGAAGGAACTTGGTCCAAAAAATTGTACCAAATGCTCTCAACACCTACAATTGATCACATTGATGTATCTGTTGAAGGCCCTTATGGACCTGCATCAACCAATTATCTAAGGCATGATTCACTTGTTATGGTTAGTGGAGGAAGTGGCATAACACCTTTTATCTCCATCATTAGGGACTTAATTTATCTTAGCACCACATTCAAGTACAAAACCCCAAAAATACTCCTAATTTGTGCATTCAAGAACACTTCATCTCTCTCAATGTTAGACTTGATCCTCCCAATTTCTGGCACCCCATTTGAAATTTCCAATTTGGAGTTACAAATTGAAGCCTACATCACAAGAGACAAGGAGTTCAAATCAAATACCTTAATCAACCTTCAAACAAAATGGTTCAAACCTAATCCAAATGATGCCCCAATATATGCCATATTAGGCCCAAATAATTGGCTTTGGTTTGGAGCTATAATTTCAAGTTCTTTCATCATTTTTCTTATTTTAATTGGGATCATTACACGTTACTACATTTTCCCTAAAGATCATAACACAAATGGAATATTCTCATACTCTTTGAAGGCTTTAATTAACATGCTAGTAATGTGTGTGTCCATAGCCATAGTTGCTAGTGTAGGTGTTCTTTGGAACAAGAAATTAAGTGCTAAGAAAGGAAATAATCAAGTTCAACATTTGGAAGGGTTATCACCAACAGTGTCACCAAGCTCAGTGGTTTATTACAATAATAATGGAGGGAATCATAATGTGGAATTGGAAAGCCTTCCAAGCCAGTTAATTGCTCAGGCTACCAATGTTCATTATGGTGAAAGACCTGACCTAAGAAAAATACTATTTGAAATAAAAGGGTCAAGCGTGGGAGTTTTTGCTTCAGGACCCAAGAAAATGAGGCAAGAGGTTGCAGCTATATGCTCAACTGGTTTAACTGAAAATCTACACTTTGAGTCCATTAGTTTTAGCTGGTAA 2187 0.3813 MGDQEILKRSPSQVKYDMILYAIRLVVLVVLLGWIFIWIMMPTSTFRQTWLPHLRAKTTTSTYFGSQGTTLLIYTFPVLFIASLGCIYLHIVKKANDSNMDRCDNRNDDKGGKETIWKRPFIVKGPLGIVSGTEVAMLLMFIGLLLWSFASYLHNFFALITQKSAAQFGVKLWELKLEDAGLILGLVGNICLAFLFFPVSRASPVLPLLGLTSESCIKYHIWLGHLVLTFFTAHGVSYIIFWAATNQISQMVKWEKIGISNVAGEISLVCGLILWIATIPGIRRKFFELFFYAHYLYIFFMLFFIFHVGISYASIMLPGFYIFMVDRFLRFLQSRTHVHLVSARVLPCDTIELNFSKTLELSYTPTSVMFINIRSISKLQWHPFTITSSSKLEPEKLSVVIKSEGTWSKKLYQMLSTPTIDHIDVSVEGPYGPASTNYLRHDSLVMVSGGSGITPFISIIRDLIYLSTTFKYKTPKILLICAFKNTSSLSMLDLILPISGTPFEISNLELQIEAYITRDKEFKSNTLINLQTKWFKPNPNDAPIYAILGPNNWLWFGAIISSSFIIFLILIGIITRYYIFPKDHNTNGIFSYSLKALINMLVMCVSIAIVASVGVLWNKKLSAKKGNNQVQHLEGLSPTVSPSSVVYYNNNGGNHNVELESLPSQLIAQATNVHYGERPDLRKILFEIKGSSVGVFASGPKKMRQEVAAICSTGLTENLHFESISFSW* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0096 728 Pfam FAD-binding domain 338 435 IPR013112 GO:0016491
Ahy12g0096 728 Pfam Ferric reductase NAD binding domain 441 712 IPR013121 GO:0016491
Ahy12g0096 728 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 333 437 IPR017927 GO:0016491
Ahy12g0096 728 Gene3D - 425 544 IPR039261 -
Ahy12g0096 728 CDD NOX_Duox_like_FAD_NADP 340 518 - -
Ahy12g0096 728 Pfam Ferric reductase like transmembrane component 184 304 IPR013130 -
Ahy12g0096 728 Gene3D - 627 727 IPR039261 -
Ahy12g0096 728 SFLD Ferric reductase subgroup (FRE) 17 728 - -
Ahy12g0096 728 SFLD Ferric Reductase Domain 41 728 - -
Ahy12g0096 728 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 425 496 IPR039261 -
Ahy12g0096 728 PANTHER NADPH OXIDASE 21 727 - -
Ahy12g0096 728 PANTHER FERRIC REDUCTION OXIDASE 2 21 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0096 Ahy-Chr12 1976479 1984131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0096 17 728 Miscellaneous Gene Families AT1G01580 59.441 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0096 K00521 - gmx:100790114 995.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0096 12 1976479 1984131 Ahy2g0146 2 1631600 1639416 hybridization
Ahy14g2513 14 130823615 130830050 Ahy12g0096 12 1976479 1984131 PCT
Ahy4g2209 4 117902944 117909287 Ahy12g0096 12 1976479 1984131 PCT
Ahy12g0096 12 1976479 1984131 Ahy14g2513 14 130823615 130830050 PCT
Ahy12g0096 12 1976479 1984131 Ahy4g2209 4 117902944 117909287 PCT