Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0053 ATGTCATTTATCTGTGGCCTTCCTATACTTGAGTGTGTTTATTGTCTTGGGTGTGCTCGTTGGGTTTGGAAGAAATGTCTGTACACTGCAGGCTATGAGAGTGAAAACTGGGGCCTAGCTACTGCTGAAGAATTCGAGCCTGTACCTCGAATCTGCCGGATAATCTTATCGGTTTATGAGGAAGATCTTCGTAACCCCCAATGGGCTCCGCCAGGGGGTTATGGCATGAACCCTGACTGGGTTGTCTTGCGTAAGGATTATGAGGATAATCAAGGTTGTGTTACTCCATACATGATATATCTTGACCATGATCATGCTGAAATTATACTGGCTGTTAGGGGCCTTAATTTAGCAAAGGAAAGTGATTATGCAGTTTTACTTGATAACAAACTGGGGCAGGCTGAGTTTCATGGTGGTTATGTTCATAATGGGTTACTTAAGGCTGCAGGCTGGGTTTTCGATGCGGAGTATGAGGTTCTTCGGGATTTGATAGCGAAGAATCCGACATATATGCTCATATTTGGTGGACACTCCCTAGGGGCAGGGGTGGTAGCATTATTGACATTGCTAGCACTTGATAACCGAGACAAATTGGGGATACAGAGAAACAAGATAAGATGCTTTGCCTTAGCTCCTACTCGGTGCATGTCTCTCAATTTGGCTGTAAGATATGCAGATGTTATCAATTCCGTTGTACTCCAGGATGATTTTTTGCCTCGGACAACTACTGCTCTAGAAGTTCTCTTCAAGTTGCTTTTATGTTTACCTTGTTTACTGTGTATAATGTGCCTAAAGGATACTTGCACACTGGAGGAGAAGATGCTTAAAGATCCAAGGCGTCTATACGCACCTGGTCGTCTCTATCACATTGTGGAGCGGAAGCCCTTGAGGATAGGAAGATTTCCACCTGTCGTTAGGACAGCAGTACCCGTTGATGGGAGGTTCGATCATATTGTTCTTTCTTGCAATGCAACTTCCGACCATGCCATCATTTGGATTGAGAGAGAAGCCCAATGGGCTCTTAATTTAATGCTAGAGAAAGATAAGCAGATGGAAATTCCGGCAGAACAAAAGATGGTCCGGCAAGAATCACTGGCTCGGGAGCACAGCCAAGAGTACCACGCGGCCCTTCAAAGGGCGGTCGCTTTGGATATTCCGCAAGCTTATTCGCCGTCCTCATACGGAACCTTTCAGGAAATACATGACGGGGAAGATTCGGGCGGTTTGAGAAGGTCCAAAGGGTCTTTCTTGTCCAACAAGCAAAGAACAGAAAGTTGGAATGAGTTTGTTGGGCGCCTTTTTGATGTAGATGACTCAGGTCATATGGTTTTCAAGAAAACAAATGTGTAA 1350 0.4489 MSFICGLPILECVYCLGCARWVWKKCLYTAGYESENWGLATAEEFEPVPRICRIILSVYEEDLRNPQWAPPGGYGMNPDWVVLRKDYEDNQGCVTPYMIYLDHDHAEIILAVRGLNLAKESDYAVLLDNKLGQAEFHGGYVHNGLLKAAGWVFDAEYEVLRDLIAKNPTYMLIFGGHSLGAGVVALLTLLALDNRDKLGIQRNKIRCFALAPTRCMSLNLAVRYADVINSVVLQDDFLPRTTTALEVLFKLLLCLPCLLCIMCLKDTCTLEEKMLKDPRRLYAPGRLYHIVERKPLRIGRFPPVVRTAVPVDGRFDHIVLSCNATSDHAIIWIEREAQWALNLMLEKDKQMEIPAEQKMVRQESLAREHSQEYHAALQRAVALDIPQAYSPSSYGTFQEIHDGEDSGGLRRSKGSFLSNKQRTESWNEFVGRLFDVDDSGHMVFKKTNV* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0053 449 CDD Lipase_3 44 240 - -
Ahy12g0053 449 Pfam Lipase 3 N-terminal region 10 74 IPR005592 GO:0016042
Ahy12g0053 449 Pfam Lipase (class 3) 110 243 IPR002921 GO:0006629
Ahy12g0053 449 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 447 - -
Ahy12g0053 449 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 447 - -
Ahy12g0053 449 Gene3D alpha/beta hydrolase 39 250 IPR029058 -
Ahy12g0053 449 SUPERFAMILY alpha/beta-Hydrolases 43 243 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0053 Ahy-Chr12 1508729 1512487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0053 1 449 Miscellaneous Gene Families AT3G49050 62.105 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0053 - - gmx:100800227 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0053 12 1508729 1512487 Ahy12g0053 12 1508729 1512487 ECH
Ahy12g0053 12 1508729 1512487 Ahy2g0016 2 131616 135373 hybridization