Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0047 ATGGATGATAGTAAAGAATCATTAACTGATGCCAATGAAGCAGAAGCCACTACTTCAACGCTCATTGCTGGTCTTCCAGATGACATATCTCTTTGCTGCTTGGCACGAATTCCTAGAAAACATCATTCGGTCCTGAAGTGTGTCTCAAAGAGATGGAGGGACTTAGTTTGCAGTGAAGAGTGGTATCAATATCGCCGAAAGCACAAACTTGATGAGACCTGGATCTATGCTTTGTGCAGGGGCGAATTAGAAGATCGGATTTGCTGCTATGTTTTGGATCCAAACTCATCAAGAAGATCTTGGAAGCTTATTCCGGGACTTCCGCCTCGCATGTTGAAGAGAAAAGGCATGGGATTTGAAGCTTTAGGAAATAAACTATTCTTATTTGGAGGTTGTGGGTGGTCTGAAGATGCTACTGATGAGGCCTATTCTTATGATGCTTCCACAAACACTTGGGTTGAAGCTGCTTCCTTGTCAACTGCTAGGTGCTACTTTGCTTCTGAAGTTTTAGGTGAGAAGTTATATGCCATTGGAGGAATAGGTTCAAATTCAAGTGATCCTCATTCTTGGGATACTTTTGACCCTTGCACAAATACTTGGATATCTCATAGAGATCCCAATATTGTTCCCGAAATAGAAGATTCTGTAGTGATGGATGGGAAGATATACATCCGGTGCGGCAAATCTCCGGTAACTCACCGCGTGTATGGCGTTGTATATGATCCGTCGAATGGCACATGGCAGCATGCCGATACTGAGCTGGTATCAGGATGGAGCGGTCCTGCAGTTGTTGTTGATGGAGTCCTTTATGTTTTGGATGAGAGTTCGGGAACGCGATTAATGATGTGGCATAAGGAGAGGCAGGAATGGTTGCCCGTTGGAAGATTTTCGCCGCTGCTTACAAGGCCTCCATGCCGGGTTGTTGCAGTTGGTAAGACCATTTTCGTTGTTGGCAGAGGACTTAGCACTGTGGTTATTGATGTTGGTGATTTGGGAAATATTGGAAAGAGAGTTATGATTGGTTCTTCCATTCCCAAATTAATGTCTGCTTCCAATGTAATTAGCTGTAAATGCTTGGCAATATGA 1086 0.4374 MDDSKESLTDANEAEATTSTLIAGLPDDISLCCLARIPRKHHSVLKCVSKRWRDLVCSEEWYQYRRKHKLDETWIYALCRGELEDRICCYVLDPNSSRRSWKLIPGLPPRMLKRKGMGFEALGNKLFLFGGCGWSEDATDEAYSYDASTNTWVEAASLSTARCYFASEVLGEKLYAIGGIGSNSSDPHSWDTFDPCTNTWISHRDPNIVPEIEDSVVMDGKIYIRCGKSPVTHRVYGVVYDPSNGTWQHADTELVSGWSGPAVVVDGVLYVLDESSGTRLMMWHKERQEWLPVGRFSPLLTRPPCRVVAVGKTIFVVGRGLSTVVIDVGDLGNIGKRVMIGSSIPKLMSASNVISCKCLAI* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0047 361 Gene3D - 64 332 IPR015915 GO:0005515
Ahy12g0047 361 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 5 335 - -
Ahy12g0047 361 SUPERFAMILY Kelch motif 73 323 IPR015915 GO:0005515
Ahy12g0047 361 SMART kelc_smart 125 172 IPR006652 GO:0005515
Ahy12g0047 361 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 5 335 - -
Ahy12g0047 361 SMART fbox_2 25 65 IPR001810 GO:0005515
Ahy12g0047 361 Pfam F-box domain 24 59 IPR001810 GO:0005515
Ahy12g0047 361 Pfam Kelch motif 114 159 IPR006652 GO:0005515
Ahy12g0047 361 Pfam Kelch motif 161 200 IPR006652 GO:0005515
Ahy12g0047 361 SUPERFAMILY F-box domain 17 69 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0047 Ahy-Chr12 1456011 1459202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0047 25 270 Miscellaneous Gene Families AT4G33900 27.715 3.14e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0047 - - qsu:112035561 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0047 12 1456011 1459202 Ahy12g0047 12 1456011 1459202 ECH
Ahy12g0047 12 1456011 1459202 Ahy2g0012 2 103449 106607 hybridization