Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0046 ATGCAAGAACAACTCTTTTCACTCGCACACTGCACCCTACCTGTGTCCAGATTCCCAAACAATGCAACTCCTCCAAATTTTGCAACTTTTCAACAATCCCATCACTCCTCCAAGCTCAGTTTCAATGTGGGTCTCAATCATTTGCTTCAAAAATCTAATTTTTTTCAAAGCGTACCTGGTTTGATGAGTAGCTATGATGGTTATGTGGGTGTAGTAGCAGAATGTGGTCCCTTTAATGGAGAAAGTGATGTTGCCGATTGTGATGATGGGTTTTACATAAGAAGGTGTGTTGAGCTTGCAAGAAAAGCTATTGGCTTCACAAGCCCCAATCCAATGGTGGGGTGTGTTATTGTGAAGGATGGGAAAATTGTTGGTCAAGGGTTCCACCCTAAAGCAGGTCAACCGCATGCTGAGGTGTTTGCCTTGAGAGATGCTGGCGATTTGGCGGAGAATGCCACGGCTTATGTGAGCTTAGAACCTTGTAATCATTTTGGAAGGACTCCACCTTGCACTGAAGCTTTAATCAAAGCCAAAGTGAAAAAAGTGGTGGTTGGGATGGTGGATCCAAATCCCCTTGTGGAATCCAAAGGGTTGGCTAGATTGAGAGATGCAGGTATTGAAGTTGTTGTCGGTGTAGAGGAAGAGTTATGCAAGAGCCTTAACGAGGCCTTTGTTCATCGCATGTTAACCGGAAAACCTCTCCTTACATTGAGATATTCTCTTTCTGTCAATGGGAATTTTTCAGACTTACTTGGAGATGGAGTTACAGAATGTGGTGGATACTATTCACGTTTATTGCAAGAATATGATGCAGTGATACTTTCCTCTTCCTTATTCAGTGGGAACATATCAATACCTGCATCTCAAGAACCTGGAGCAAATCAGCCGCTCCGGATTGTAATACATAAGGATTCTAGTTCTTCAAATGAAATTCCACTTGCTGTCAATGAAGTTACTGATAAAGTGATAGTTTTTACAGATAATGGAACAGCAAGCGCTCTAGAACTGGCCAAAAAAGGAATTGAAACCGTCATTTTGGATCATATAAATCTAGATGTGATTCTGGACTATTGTAATCGACAAGGGATGTGCAGTGTTCTGTTAGATTTGAGGGGAAATTCCAGTGAGTTTGAAGAGCTTGTTAAGGAGGGAATTCAGAAGAAAAACATTAGTAAATTTATGATAGAAATTTTGCCTATTTGGAATAAAAGTAGTGAGACAGATCCTCTAATACCGGTAAAAAGGTTAGATCAAGGAATCCAAGTGGAAAATTTAAAGTCCAAGTGTTCAGATCAAAATGTTATAATTGAAGGACATTTTAAATTTTAA 1329 0.4003 MQEQLFSLAHCTLPVSRFPNNATPPNFATFQQSHHSSKLSFNVGLNHLLQKSNFFQSVPGLMSSYDGYVGVVAECGPFNGESDVADCDDGFYIRRCVELARKAIGFTSPNPMVGCVIVKDGKIVGQGFHPKAGQPHAEVFALRDAGDLAENATAYVSLEPCNHFGRTPPCTEALIKAKVKKVVVGMVDPNPLVESKGLARLRDAGIEVVVGVEEELCKSLNEAFVHRMLTGKPLLTLRYSLSVNGNFSDLLGDGVTECGGYYSRLLQEYDAVILSSSLFSGNISIPASQEPGANQPLRIVIHKDSSSSNEIPLAVNEVTDKVIVFTDNGTASALELAKKGIETVILDHINLDVILDYCNRQGMCSVLLDLRGNSSEFEELVKEGIQKKNISKFMIEILPIWNKSSETDPLIPVKRLDQGIQVENLKSKCSDQNVIIEGHFKF* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0046 442 Gene3D Dihydrofolate Reductase, subunit A 227 440 IPR024072 -
Ahy12g0046 442 SUPERFAMILY Dihydrofolate reductase-like 233 369 IPR024072 -
Ahy12g0046 442 CDD Riboflavin_deaminase-reductase 93 205 - -
Ahy12g0046 442 Gene3D Cytidine Deaminase, domain 2 83 226 - -
Ahy12g0046 442 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 87 209 IPR002125 -
Ahy12g0046 442 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 86 278 - -
Ahy12g0046 442 PANTHER RIBOFLAVIN BIOSYNTHESIS PROTEIN PYRD, CHLOROPLASTIC 86 278 - -
Ahy12g0046 442 TIGRFAM eubact_ribD: riboflavin biosynthesis protein RibD 94 395 IPR004794 GO:0008835|GO:0009231
Ahy12g0046 442 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 92 186 IPR002125 -
Ahy12g0046 442 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 136 174 IPR016192 GO:0008270|GO:0016787
Ahy12g0046 442 SUPERFAMILY Cytidine deaminase-like 89 228 IPR016193 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0046 Ahy-Chr12 1452848 1455054 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0046 K11752 - gmx:100786393 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0046 12 1452848 1455054 Ahy12g0046 12 1452848 1455054 ECH
Ahy12g0046 12 1452848 1455054 Ahy2g0011 2 100129 102503 hybridization