Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0045 ATGAACCAATACCACACAAACCCCACCACCACTACTACCAAATTTTATTCCCAATTCACCCCAAAATGCAACCACCTCAACCATCACAACCCCAAACCTCTCTCCTTCAACCTCACCATATCTTCTTCTCTCAAAAACCAATCACAAGACCCATCAAAGGATCCTCCTTTTTCACAAACCCTAACTTCAATTTTCCTCTCGCTGCCGGACTGGGCCGACGCCGTCAAAGAGCGTGGCATGCAGAGGAAGAGGGGACTCTACACCCACACCGAGTGGCTCCAGCACCGCTCCTCCCTCCGCCACCTCCGCCACCTCCTCTCGACCCTCTCCTCCCGTGTCGTCCTCTCTTTGCTCCCTCCAGTCCTCGCATTCACAACCTTCGCCGCCGCTATCGCCGCCTACAACTCCGCCGTCTCCGCACACTTCCTGCTCCCGGAGTATTTCCCGGTTCTCAGGGCTTCTTCTCTGCCTTACCAGCTCACCGCACCCGCCCTGGCCCTCCTCCTCGTTTTCCGAACCGAGGCTTCATACGCAAGATTTGTGGAGGGGAAGAAGGCATGGACCAAGGTCATTGCTGGGGCACACGATTTTGCTACGCAGGTTATGGCTGTTGTTGAGAGTCCTTCGGATTTGCCTCTCAAGAAGGCACTTTTGCAGTACATCATGGCATTTCCTGTTGTGCTTAAGTGTCATGTGTTGTATGGTTCAGATGTTAGGAGTGATCTTCAGCATGTGCTAGAAGTAGATGATCTAGCTATAGTGATTAATTCGAAACATAGACCTCGGTGCATTGTTGACTTCATATCTCAAAGCATTCATCTGCTAAAGTTGGAGGATGCCAGAAGAAGTGCATTGGAATCAAAGATCTCTTGTTTCCAAGACGGGATTGGCATCTGTGAACAACTTATGGGTATTCCCATTCCACTATCATATACTCGCTTGACGTCAAGGTTTCTTGTCCTGTGGCATTTAACGCTCCCTGTCATACTTTGGGATGATTGTCATTGGATGGTGGTTCCTGCTACCTTCATTAGTGCTGCTTCTTTGTTCTGCATTGAAGAAGTTGGAGTTCTTATAGAGGAGCCATTTCCTATGCTTGCACTTGATGCTCTGTGCCAAAAGGCCCATAACGACATCCAAGAATCAATTGAAGCTGAAAACTTAATCCACACTCAACTTGTTGCAAAGCAAAAGAAGGCAAAGAAGCACTCCCAGAGCGGCCACACGAAGGAGCATTCACCAAATGGCTGGCCTAATTCCTAG 1263 0.4925 MNQYHTNPTTTTTKFYSQFTPKCNHLNHHNPKPLSFNLTISSSLKNQSQDPSKDPPFSQTLTSIFLSLPDWADAVKERGMQRKRGLYTHTEWLQHRSSLRHLRHLLSTLSSRVVLSLLPPVLAFTTFAAAIAAYNSAVSAHFLLPEYFPVLRASSLPYQLTAPALALLLVFRTEASYARFVEGKKAWTKVIAGAHDFATQVMAVVESPSDLPLKKALLQYIMAFPVVLKCHVLYGSDVRSDLQHVLEVDDLAIVINSKHRPRCIVDFISQSIHLLKLEDARRSALESKISCFQDGIGICEQLMGIPIPLSYTRLTSRFLVLWHLTLPVILWDDCHWMVVPATFISAASLFCIEEVGVLIEEPFPMLALDALCQKAHNDIQESIEAENLIHTQLVAKQKKAKKHSQSGHTKEHSPNGWPNS* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0045 420 MobiDBLite consensus disorder prediction 397 420 - -
Ahy12g0045 420 PANTHER BESTROPHIN/UPF0187-RELATED 27 409 - -
Ahy12g0045 420 PANTHER UPF0187 PROTEIN YNEE 27 409 IPR044669 -
Ahy12g0045 420 Pfam Bestrophin, RFP-TM, chloride channel 95 372 IPR021134 GO:0005254
Ahy12g0045 420 PIRSF UCP016988 5 420 IPR024701 GO:0005247|GO:0042548
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0045 Ahy-Chr12 1448975 1452397 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0045 K08994 - gmx:100786921 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0045 12 1448975 1452397 Ahy12g0045 12 1448975 1452397 ECH
Ahy12g0045 12 1448975 1452397 Ahy2g0010 2 96569 99945 hybridization