Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0032 ATGGCAGAACAACCAACCAAGGTGGAGACACCTCCTGCTCCGCTGGTAACTGACCCTCCTCTGGCCGAGGCACCGCCGCAGCTCCAAGATGCTGCTGAGAAGAAACCGCTGGCTCCGCCTCCGGCAGCCGCTGCAGAAGGGACCAAGGCTCTAGTTGTTGTTGAGAATGAGAAAGCAGTGGAGCCAATTAAAAAGAAAACATCCCTTGATAGAGATATTGCTCTTGCAGAAGTGGAAAAGGAGAAAAAGTTGTCTTATGTGAAGGCATGGGAAGAAAGTGAAAAATCTAAAGCAGAGAATAAAGCTCAGAAGCAGTTATCTGCTGTTGGTGCTTGGGAAAATAGCAAGAAAGCAGCTCTTGAAGCTAAGCTGAGAAAAATTGAGGAACAGTTGGAGAAAAAGAAAGCAGAATATGGCGAACAAATGAAGAACAAGATAGCATTGATTCACAAGCAAGCTGAGGAGAAGAGAGCAATGGTTGAAGCAAAGCGTGGTGAGGAATTTCTCAAGGCTGAGGAAACCGCCGCTAAATATCGTGCAACTGGGACCACTCCAAAGAAGCTCCTCGGATGCTTTTGA 579 0.4715 MAEQPTKVETPPAPLVTDPPLAEAPPQLQDAAEKKPLAPPPAAAAEGTKALVVVENEKAVEPIKKKTSLDRDIALAEVEKEKKLSYVKAWEESEKSKAENKAQKQLSAVGAWENSKKAALEAKLRKIEEQLEKKKAEYGEQMKNKIALIHKQAEEKRAMVEAKRGEEFLKAEETAAKYRATGTTPKKLLGCF* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0032 192 MobiDBLite consensus disorder prediction 1 46 - -
Ahy12g0032 192 Coils Coil 117 144 - -
Ahy12g0032 192 PANTHER CARBOXY-TERMINAL REGION REMORIN 14 192 - -
Ahy12g0032 192 Pfam Remorin, C-terminal region 82 187 IPR005516 -
Ahy12g0032 192 Pfam Remorin, N-terminal region 29 78 IPR005518 -
Ahy12g0032 192 PANTHER OS02G0117200 PROTEIN 14 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0032 Ahy-Chr12 1338904 1342085 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0032 - - gmx:100802984 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2401 14 127353017 127355567 Ahy12g0032 12 1338904 1342085 PCT
Ahy4g2119 4 115373654 115375864 Ahy12g0032 12 1338904 1342085 PCT
Ahy12g0032 12 1338904 1342085 Ahy14g2401 14 127353017 127355567 PCT
Ahy12g0032 12 1338904 1342085 Ahy4g2119 4 115373654 115375864 PCT