Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g3108 ATGGTGGTGAAGAAGCCAAGGATTGTGATAGTTGGAGCAGGAATGGCAGGGCTCACTGCTGCCAACAAGCTCCACAGTGTGACAGCCTCAAAGGACTTGTTTGAGGTTTGTGTTGTGGAAGGTGGAAGCAGGATTGGAGGGAGAATCAACACCTCTGAGTTCTGTGGTGACCAGATTGAGCTTGGTGCTACTTGGATCCATGGAATTGGAGGAAGCCCTCTTCACAAGATTGCTCAACAAACACACTCATTGCTTTCTGACAAGCCTTGGGAGTGCATGGATGGAAACTCATCAGATCAAACCACCATCACCATTGCTGAAGGTGGCTTCCACTTGGACCCTTCCATTGTAAACCCCATCACAAGGCTCTTCAAGAACCTCATGGATCATGCTCAGGGCAAGAACCAGAAGAACAACATCACTGAACGAGATACTACTGCAAGAGGTGATGAATTTCTTCACAGCTTCTGTAAGAAGGTGTCAACAAGAGTTGGCTCTGCAGGCCTTAGTATTGGTTCTTTCCTCAGGGGAGGCCTTGATGCATACTGGGATTCATCAAAGGATCAAGAGGAGTTCAAAGGGTGTGGGATATGGAACAGGAAGTTACTTGAAGAAGCAATCTTCGCAATGCATGAGAACACACAGAGGACATACACATCTGCTGGTGATCTCTTGAACCTTGATTACAATGCTGAGAGTGAATACCAAATGTTCCCTGGTGAAGAAATCACTATTGCTAAAGGCTACTTGAGCATAATTGAGTACTTGGCTTCTGCTCTACCGCCTGGGGTAATTCAGTTAGGTAGAAAAGTCACAAGAATTCAATGGCAACCAGAGAGACATGAACAAAATGGTTTCTGTTCTTCTAGGCCTGTGAAGCTACACTTCTGTGATGGATCAGTTATGCATGCTGATCATGTCATTATCACTGTTTCACTTGGAGTGCTAAAAGCTGCTATTGGTGATGATCAAGGTATGTTTCAGCCCCCTCTTCCAAATTACAAGGCTGAAGCAATTTCAAGGCTTGGTTTTGGTGTTGTTAACAAGTTGTTTATGCAATTGAGCCCAACAACACATCATTGTAAAGACGGTCATCACCGCCCCAAAAGGTTCCCATACTTGCAATTGGTTTTTCATTCACCTCACTCTGAGATGAGGCACAAGAAGATACCTTGGTGGATGAGGAGGTCACCTACCCTTTGTCCAATCTACAAGAATTCCAGTGTCCTCCTTTGTTGGTTTGCTGGGGAAGAAGCAAAGGCACTTGAGTCACTCAAAGATGAAGAGATCATCAATGGAGCTTCAGACACATTCTCCAGCTTTCGGTGTTCTGGTTATTCATACAATGAAGTTAAGTTCAGCAAAGTGTTGAAGACAAAATGGGCAACAGATCCTTTGTTTTTAGGGTCATACAGTTATGTTGCTGTGGGATCAAGTGGTGAAGATTTTGATACAATGGCTGAGCCATTGCCTAGAGAAAGCACATCATCACCACCACTTCAGATTTTGTTTGCAGGGGAAGCAACTCACAGAACCCATTATTCCACAACTCATGGAGCTTACTTCAGTGGCCTTAGGGAAGCCAATAGGCTTCTTCAACATTATCACTGCCTTGGGATATATAACAACTAG 1632 0.4442 MVVKKPRIVIVGAGMAGLTAANKLHSVTASKDLFEVCVVEGGSRIGGRINTSEFCGDQIELGATWIHGIGGSPLHKIAQQTHSLLSDKPWECMDGNSSDQTTITIAEGGFHLDPSIVNPITRLFKNLMDHAQGKNQKNNITERDTTARGDEFLHSFCKKVSTRVGSAGLSIGSFLRGGLDAYWDSSKDQEEFKGCGIWNRKLLEEAIFAMHENTQRTYTSAGDLLNLDYNAESEYQMFPGEEITIAKGYLSIIEYLASALPPGVIQLGRKVTRIQWQPERHEQNGFCSSRPVKLHFCDGSVMHADHVIITVSLGVLKAAIGDDQGMFQPPLPNYKAEAISRLGFGVVNKLFMQLSPTTHHCKDGHHRPKRFPYLQLVFHSPHSEMRHKKIPWWMRRSPTLCPIYKNSSVLLCWFAGEEAKALESLKDEEIINGASDTFSSFRCSGYSYNEVKFSKVLKTKWATDPLFLGSYSYVAVGSSGEDFDTMAEPLPRESTSSPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCLGIYNN* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g3108 543 SUPERFAMILY FAD/NAD(P)-binding domain 3 535 IPR036188 -
Ahy11g3108 543 Gene3D - 136 479 - -
Ahy11g3108 543 PANTHER POLYAMINE OXIDASE 5-RELATED 1 539 - -
Ahy11g3108 543 SUPERFAMILY FAD-linked reductases, C-terminal domain 343 473 - -
Ahy11g3108 543 Gene3D - 117 530 IPR036188 -
Ahy11g3108 543 Pfam Flavin containing amine oxidoreductase 15 532 IPR002937 GO:0016491
Ahy11g3108 543 PANTHER FLAVIN MONOAMINE OXIDASE 1 539 - -
Ahy11g3108 543 Gene3D - 1 109 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g3108 Ahy-Chr11 148708178 148710709 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g3108 K12259 - gmx:100783032 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3108 11 148708178 148710709 Ahy11g3108 11 148708178 148710709 ECH
Ahy11g3108 11 148708178 148710709 Ahy1g1856 1 95153881 95156582 hybridization
Ahy11g3108 11 148708178 148710709 Ahy13g2183 13 42471605 42474169 PCT
Ahy11g3108 11 148708178 148710709 Ahy3g1873 3 40537515 40540164 PCT
Ahy13g2183 13 42471605 42474169 Ahy11g3108 11 148708178 148710709 PCT
Ahy3g1873 3 40537515 40540164 Ahy11g3108 11 148708178 148710709 PCT