Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g3101 ATGGGGATTGAGGTACTTATTATTAATAGTGTTCTCCTTATAGGGTTTGCGGTTGCTGCATCCGCAGGTAACTTCAACCAAGACTTTGAAATTACATGGGGTAATGACCGTGCCAAAGTTCTCAACAACGGACAGCTTCTGACGCTGTCCCTTGACAAGGCCTCCGGCTCCGGCTTCCGTTCCCGGAACGAGTACCTGTTTGGAAAGATCGACATGCAGCTTAAACTTGTTCCTGGTAATTCAGCAGGCACAGTCACAGCCTATTATCTAAGTTCACTTGGTGACACTCACGATGAGATAGACTTTGAATTTCTGGGGAACTTGAGTGGTGAACCATACACTCTGCACACGAATGTATTCACGCAAGGGAAAGGCAACAGAGAACAACAGTTCCATCTATGGTTCGACCCCACCAAGGACTTCCATACTTATTCTCTTCTTTGGAATCCTCAAAGCATCATATTCTCTGTGGACGGCACACCAATAAGGGAGTTCAAGAATTGGGAATCAAAAGGAGTTCCATTTCCTAAGAATCAAGCAATGAGGATATACTCAAGTCTATGGGACGCAGAAGATTGGGCCACAAGGGGTGGGCTTGTGAAGACTGATTGGACCCAAGCCCCATTCACAGCCTCATACAAAGGCTTCAATGCACAAGCTTGTGTTTGGAGCTCTTCTTCAGGCTCCTCTTGTTCTTCAAAACAAGGCCAATCATGGTTCACTCAGTCACTTGACTCAACTGGGCAAGCAAGAATCCAGTGGGTTCAGAAGAACTACATGATCTACAATTACTGCACTGATACCAAACGATTCCCACAAGGCCTTCCTCCTGAATGCACCCTTGCATGA 849 0.4617 MGIEVLIINSVLLIGFAVAASAGNFNQDFEITWGNDRAKVLNNGQLLTLSLDKASGSGFRSRNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSLGDTHDEIDFEFLGNLSGEPYTLHTNVFTQGKGNREQQFHLWFDPTKDFHTYSLLWNPQSIIFSVDGTPIREFKNWESKGVPFPKNQAMRIYSSLWDAEDWATRGGLVKTDWTQAPFTASYKGFNAQACVWSSSSGSSCSSKQGQSWFTQSLDSTGQARIQWVQKNYMIYNYCTDTKRFPQGLPPECTLA* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g3101 282 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 281 IPR013320 -
Ahy11g3101 282 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 19 213 IPR000757 GO:0004553|GO:0005975
Ahy11g3101 282 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 4 281 - -
Ahy11g3101 282 Pfam Glycosyl hydrolases family 16 26 205 IPR000757 GO:0004553|GO:0005975
Ahy11g3101 282 PRINTS Glycosyl hydrolase family 16 signature 115 128 IPR008264 GO:0004553|GO:0005975
Ahy11g3101 282 PRINTS Glycosyl hydrolase family 16 signature 57 75 IPR008264 GO:0004553|GO:0005975
Ahy11g3101 282 PRINTS Glycosyl hydrolase family 16 signature 133 150 IPR008264 GO:0004553|GO:0005975
Ahy11g3101 282 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 236 279 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Ahy11g3101 282 CDD GH16_XET 20 279 IPR016455 GO:0010411|GO:0016762|GO:0042546
Ahy11g3101 282 PIRSF EndGlu_transf 1 282 IPR016455 GO:0010411|GO:0016762|GO:0042546
Ahy11g3101 282 ProSitePatterns Glycosyl hydrolases family 16 active sites. 99 109 IPR008263 GO:0004553|GO:0005975
Ahy11g3101 282 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 4 281 IPR044791 GO:0004553
Ahy11g3101 282 Gene3D - 11 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g3101 Ahy-Chr11 148648630 148650189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g3101 3 282 Glycoside Hydrolase AT4G25810 72.183 1.37e-152 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g3101 K14504 - gmx:100807063 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3101 11 148648630 148650189 Ahy1g1870 1 95261598 95263193 hybridization
Ahy11g3101 11 148648630 148650189 Ahy13g2177 13 41806412 41808701 PCT
Ahy11g3101 11 148648630 148650189 Ahy3g1866 3 39788948 39791572 PCT
Ahy13g2177 13 41806412 41808701 Ahy11g3101 11 148648630 148650189 PCT
Ahy3g1866 3 39788948 39791572 Ahy11g3101 11 148648630 148650189 PCT