Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2643 ATGGCGGACAAGTACAACCTCAAGAACCCTGCCGTCAAGCGCATTCTCCAGGAGGTCAAAGAGATGCAATCCAACCCTTCTGATGATTTCATGAGCCTCCCGCTTGAGGAAAATATATTTGAATGGCAATTTGCGATTAGGGGGCCTCGTGATACTGAATTTGAGGGTGGTATTTATCATGGGCGGATTCAGTTGCCAGCAGAATATCCATTCAAACCACCTTCATTTATGCTTTTGACCCCTAATGGTCGTTTTGAGACCCAAACCAAGATTTGCTTGAGCATCTCTAATCATCACCCTGAGCATTGGCAACCATCATGGAGCGTAAGGACTGCTTTAGTTGCACTGATTGCATTCATGCCAACCAACCCAAATGGTGCATTGGGCTCATTAGACTACAAGAAGGAAGAGAGGCGCACATTGGCAATTAAATCCCGTGATGCAGCGCCAAGGTTTGGGACTCCTGAGCGGCAAAAACTGATTGATGAGATACACGAGTATATGCTAAGCAAGGCGCCCCCAGTTCCTGAACTTGGCCCCTCACAGACTTCCGAAGAACAAGAACAACCCAGAATTGAAGAGGCCAAGGCCGAGGTTGATGTGCAAAATCCTGAGGCTTTACCTGCTGGAGAGGAGATTGCAGATCAAGCAGCTGATGAAATTGTTGAAGAACAAGAACTTCCTATCGATGCTAATCCTAATCCTGCAGGAATTGAAGCTTCAACAGAGATTCCATCGGCTGTCTCTAGCACTCAGTCTCTCCAAAAGTCAAATACAATGATACAAAATCTGAAACCAGAGACGAGGGTCCAAAAGCCTGATGATCGCTTGTTCACACTGGCAGCTATTGGACTTACTATAGCAATTGTTGTCCTTTTGCTGAAGAAGTTCATCAAATCCACAGAATATGGTGCGGTTTTCATGAATGGTGGGTCGTAG 939 0.459 MADKYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPRDTEFEGGIYHGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRTLAIKSRDAAPRFGTPERQKLIDEIHEYMLSKAPPVPELGPSQTSEEQEQPRIEEAKAEVDVQNPEALPAGEEIADQAADEIVEEQELPIDANPNPAGIEASTEIPSAVSSTQSLQKSNTMIQNLKPETRVQKPDDRLFTLAAIGLTIAIVVLLLKKFIKSTEYGAVFMNGGS* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2643 312 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 6 309 - -
Ahy11g2643 312 SUPERFAMILY UBC-like 11 133 IPR016135 -
Ahy11g2643 312 SMART ubc_7 13 173 - -
Ahy11g2643 312 Pfam Ubiquitin-conjugating enzyme 14 125 IPR000608 -
Ahy11g2643 312 MobiDBLite consensus disorder prediction 172 192 - -
Ahy11g2643 312 Gene3D Ubiquitin Conjugating Enzyme 2 174 IPR016135 -
Ahy11g2643 312 PANTHER BNAC01G21910D PROTEIN 6 309 - -
Ahy11g2643 312 CDD UBCc 12 127 IPR000608 -
Ahy11g2643 312 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 173 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2643 Ahy-Chr11 142641553 142644237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2643 1 312 Miscellaneous Gene Families AT3G17000 64.669 3.46e-136 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2643 K10578 - gmx:100804054 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2643 11 142641553 142644237 Ahy11g2643 11 142641553 142644237 ECH