Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2607 ATGGCCGTCTTCACTTTTGAGGATGAAATCACCTCCACCGTCCCCCCTGCTAAGCTTTACAATGCTATGAAGGATGCCGACTCCATCACCCCTAAGATTATTGATGACGTCAAGAGTGTTGAAATTGTTGAGGGAAACGGTGGTCCCGGAACCATCAAGAAACTCACCATTGTCGAGGATGGAGAAACCAAGTTTATCTTGCACAAGGTGGAGGCAATAGATGAGGCTAACTATGCATACAACTACAGCGTTGTTGGAGGAGTGGCTCTGCCTCCTACGGCGGAGAAGATAACATTTGAGACAAAGCTAGTTGAAGGACCCAACGGAGGATCCATTGGGAAGTTGAGTGTGAAGTTCCACTCGAAAGGAGATGCAAAGCCAGATGAGGAAGCCATGAAGAAGGGGAAGGCCAAGGGTGAAGCTCTCTTCAAGGCTATTGAGGGTTACGTTTTGGCCAACCCTGCTCTCTATTGA 474 0.4831 MAVFTFEDEITSTVPPAKLYNAMKDADSITPKIIDDVKSVEIVEGNGGPGTIKKLTIVEDGETKFILHKVEAIDEANYAYNYSVVGGVALPPTAEKITFETKLVEGPNGGSIGKLSVKFHSKGDAKPDEEAMKKGKAKGEALFKAIEGYVLANPALY* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2607 157 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 87 119 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Ahy11g2607 157 CDD Bet_v1-like 4 150 - -
Ahy11g2607 157 PANTHER - 1 155 - -
Ahy11g2607 157 SUPERFAMILY Bet v1-like 4 155 - -
Ahy11g2607 157 PANTHER ABA-RESPONSIVE PROTEIN 1 155 - -
Ahy11g2607 157 PRINTS Major pollen allergen Bet V1 signature 83 96 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Ahy11g2607 157 PRINTS Major pollen allergen Bet V1 signature 48 57 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Ahy11g2607 157 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Ahy11g2607 157 PRINTS Major pollen allergen Bet V1 signature 64 83 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Ahy11g2607 157 PRINTS Major pollen allergen Bet V1 signature 108 124 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Ahy11g2607 157 PRINTS Major pollen allergen Bet V1 signature 142 152 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Ahy11g2607 157 Pfam Pathogenesis-related protein Bet v 1 family 1 153 IPR000916 GO:0006952
Ahy11g2607 157 Gene3D - 1 156 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2607 Ahy-Chr11 142255797 142256794 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2607 - - gmx:100500525 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2607 11 142255797 142256794 Ahy11g2607 11 142255797 142256794 ECH
Ahy14g0979 14 16344851 16346206 Ahy11g2607 11 142255797 142256794 PCT
Ahy4g0895 4 15625047 15626364 Ahy11g2607 11 142255797 142256794 PCT