Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2060 ATGAATAATCTAAAAAAAAAAAAACACGGAGCAGTAGAGACTAGAGAGAGAGTGATGAAGCGGAATACGTGGCGGTCAGCGAGCTCTGCGTTTTTCCACTCCGTGGACTTTTCCCAATCAAAAAACGAAAAAAAAAAAAAAAAACTGACCCTTCCTTCCTTAGCGTTCGTTACGTTAACTTTCCAATCACGAAGAAGAAGAAGCAACATGGAGCTGTGGAACAAAGCTCGAAGTTTAGCGGCAGAGGCAGCAAAACGATCTCATGACCTGTCGTTTGGAGCTTCCAAGCTTTCCAAAGAATTCGCCGCTCAAGCTTCCGAGCTAAGCGCCCAAGCCATCAAGCGAGCCGATCAGATCAAGCTCCTCGCCCTCGCCGACTCCGCCACCGCAACCGCACCTTCTCCGCCCGACGATGTCGACCTCGAAGCTTTCGGCATCACCGACCATCTCAGAGAATTCGTCACCGGCATCACCGTCACCACCTTCCGAGATTTCCCTCTTCAAGATGATACTGAATTGTCTGATGTCCCTGCTGTTTCTAATGTTAGGCAGGACCTAACCGATTGGCAGGAGAAACATGCCAAACTTGTTCTTTCTGCAGTCAAGGAAATTTCAAGATTGAGGTATGAGCTGTGTCCACGTGTTATGAAAGAGAGGAAGTTCTGGAGAATATATTTTATACTTGTGAATAATCATATTGCACCCTATGAGAAAAAGTACATGGAAGATGCTAAACTAAAATCATCTGAACAAGTAAAAGATCAGACAGTGATGGAACCATTAGAAGTTGAATTGACCTCTAATCAAGAAGTGCAGGAAGTGAAAAAGGAGACTAAAACTAAAACTTCAACAACTGAGCAAGACTTGGATGTATTTCTTCTGGGAGATGCAGGAGACAGTGACAATGATCAAGATAATGGCAATGGGGGCTTGGATGATGATTTAGACAACCTGGTGGAAAGTTCCGATGATGAGAAATGA 981 0.4444 MNNLKKKKHGAVETRERVMKRNTWRSASSAFFHSVDFSQSKNEKKKKKLTLPSLAFVTLTFQSRRRRSNMELWNKARSLAAEAAKRSHDLSFGASKLSKEFAAQASELSAQAIKRADQIKLLALADSATATAPSPPDDVDLEAFGITDHLREFVTGITVTTFRDFPLQDDTELSDVPAVSNVRQDLTDWQEKHAKLVLSAVKEISRLRYELCPRVMKERKFWRIYFILVNNHIAPYEKKYMEDAKLKSSEQVKDQTVMEPLEVELTSNQEVQEVKKETKTKTSTTEQDLDVFLLGDAGDSDNDQDNGNGGLDDDLDNLVESSDDEK* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2060 326 ProSiteProfiles BSD domain profile. 181 233 IPR005607 -
Ahy11g2060 326 SUPERFAMILY BSD domain-like 145 237 IPR035925 -
Ahy11g2060 326 MobiDBLite consensus disorder prediction 306 326 - -
Ahy11g2060 326 MobiDBLite consensus disorder prediction 269 284 - -
Ahy11g2060 326 Pfam BSD domain 187 233 IPR005607 -
Ahy11g2060 326 PANTHER BSD DOMAIN-CONTAINING PROTEIN 70 324 - -
Ahy11g2060 326 PANTHER BSD DOMAIN PROTEIN 70 324 - -
Ahy11g2060 326 MobiDBLite consensus disorder prediction 268 326 - -
Ahy11g2060 326 SMART wurzfinal6 181 233 IPR005607 -
Ahy11g2060 326 Gene3D BSD domain 161 244 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2060 Ahy-Chr11 130583829 130588604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2060 71 301 EF-hand Containing Proteins AT1G69030 41.053 3.75e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2060 - - ahf:112722625 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2060 11 130583829 130588604 Ahy11g2060 11 130583829 130588604 ECH
Ahy11g2060 11 130583829 130588604 Ahy1g2866 1 109286260 109290938 hybridization