Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2012 ATGATGGAGTCAGGGAAAGACAACGGCACCAAACTCACCGGTCAACGGCGCGTGGGTCTACTCTACGACGAGAGGATGTGTAAGCACGAGAACCTTCACGACGGTTACCATCCCGAAACCCCCAACCGTATTAGGTCCATTTGGAACAAGCTTCAATCCACGGGCATTACCCAACGATGTGTGATTTTGGATGCTAAAGAAGCTGAAGACAAACATATACTGTCAGTACATTCCAAAAAACATGTGAATTTTATCAAGAAAATAAGCTCAGAGTCAGATTCACGGAGGCTTAAGACTGCGTCAAAATTTGATTCGATATACTTCAATGAAGGTTCATCAGAAGCTGCTTATCTTGCTGCTGGCTCTGCTATAGAGGTTGTTGAAAGAGTGGCAAGCAGGGAATTCAATTCTGCTTTTGCAATTGTTAGGCCTCCAGGTCATCATGCAGAACGTGATGAACCCATGGGTTTTTGTCTATTCAACAATGTGGCGATTGCGGCAACGTATCTCTTAGAGGAACGTCCAGAATTAGGTATTAAAAAAATTTTAATTGTTGATTGGGACATCCATCATGGAAATGGTACACAAAAAATGTTCTGGAATGACTCTCGAGTTTTATTCTTCTCTGTTCACAGGCATGAATTTGGGAGCTTTTATCCTGCAAGTGATGATGGCTTTTATACGATGGTTGGAGAAGGAGCAGGTGCTGGATATAATATAAATGTACCATGGGAGAATGGAAGATGTGGTGATGCAGATTACTTTGCAGTGTGGGACCACATTTTGCTACCTGTTGCCAAAGAGTTTAATCCAGACATGATTATTGTTTCTGCTGGCTTTGATGCAGCCATTGGTGATCCTCTGGGGGGCTGTCGTGTTTCGCCATTTGGTTATTCTGTCCTGTTGAAAAAGTTGATGAATTTCGCTGAAGGTAGGATTGCACTAATTTTAGAAGGAGGATATAACCTTGACTCCATTGCAAAGTCGACGCATGCTTGCGTGGAGGTTTTGCTTGAAGACGAGCCTATTGTTGGTTCATCTGAGGCCTATCCATTTGAGTCCACCTGGCGTGTGATTCAAGCAGTTCGCCAGGAATTAAGTTGCTTTTGGCCTACACTTGCTAATGAATTGCCACAAAAATTAATTTCTCAGATTGCTCCTCCCCCACATACTCTTATCTCAAGCTCCGACTCCGAGACAGAGGATGACAAGGGTCGGCAGAATTCAGATCTTGCAGAGCTTCTACAGGATGTCATAAAACCACTTTCTGAGCTGAAGGTTGATGCAGATCATCAGATTGATGATATGAATTCCTGGCGAACAGAATTTTCAAATATTTACATATGGTATGCCTCATATGGATCAAATATGTGGAATTCAAGATTTTTGTGCTATGTAGCAGGTGGACAGGTGGAAGGCATGAAAAACACCTGTTCTGGTTCACTGGATAAAGCTTTGCCGAAGGCAATAGTATGGAAGACTTTTCCTTGCCATACATTTTTTGGCCGTGAAGCTTCACATACGTGGGGTCCTGGAGGGGTTGCATTGCTTAATCCAGTAGAAACATCTCAGTACAAGACACACATGTGTCTGTACAAAATTTCGATGGAGCAATTCAATGATATTTTATTTCAGGAAAATGGATTAAGCATTGATACTGGCTCTCCTTTACTTGATATAGCAACCCTGAATGCTATCTCTGAGAAGGAATTCAATTCTCAGGAGGTTAAGGATGGTTGGTATGGTAATGTTGTTTACTTGGGGAAGGAGCAGGACATCCCCATAGTTACCATGACGTGTTCGCTCGCTGATATTGAAGGCTTCAAATCTGGGAAGCTACCATTACGAGCCCCTAATGAGGCATATACCAAAACCTTAATTAAAGGATTGGTAGAGGGCAAACAACTTTCTGAGGGGGAAGCCATTGCTTACATTGAAGCTGCTTCTAAATCCTTAATTTGCAGCTAG 1968 0.4258 MMESGKDNGTKLTGQRRVGLLYDERMCKHENLHDGYHPETPNRIRSIWNKLQSTGITQRCVILDAKEAEDKHILSVHSKKHVNFIKKISSESDSRRLKTASKFDSIYFNEGSSEAAYLAAGSAIEVVERVASREFNSAFAIVRPPGHHAERDEPMGFCLFNNVAIAATYLLEERPELGIKKILIVDWDIHHGNGTQKMFWNDSRVLFFSVHRHEFGSFYPASDDGFYTMVGEGAGAGYNINVPWENGRCGDADYFAVWDHILLPVAKEFNPDMIIVSAGFDAAIGDPLGGCRVSPFGYSVLLKKLMNFAEGRIALILEGGYNLDSIAKSTHACVEVLLEDEPIVGSSEAYPFESTWRVIQAVRQELSCFWPTLANELPQKLISQIAPPPHTLISSSDSETEDDKGRQNSDLAELLQDVIKPLSELKVDADHQIDDMNSWRTEFSNIYIWYASYGSNMWNSRFLCYVAGGQVEGMKNTCSGSLDKALPKAIVWKTFPCHTFFGREASHTWGPGGVALLNPVETSQYKTHMCLYKISMEQFNDILFQENGLSIDTGSPLLDIATLNAISEKEFNSQEVKDGWYGNVVYLGKEQDIPIVTMTCSLADIEGFKSGKLPLRAPNEAYTKTLIKGLVEGKQLSEGEAIAYIEAASKSLICS* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2012 655 Pfam Histone deacetylase domain 37 336 IPR023801 -
Ahy11g2012 655 Gene3D - 440 651 - -
Ahy11g2012 655 Gene3D Histone deacetylase domain 11 386 IPR037138 -
Ahy11g2012 655 PRINTS Histone deacetylase superfamily signature 144 167 IPR000286 -
Ahy11g2012 655 PRINTS Histone deacetylase superfamily signature 271 281 IPR000286 -
Ahy11g2012 655 PANTHER HISTONE DEACETYLASE 15 566 - -
Ahy11g2012 655 PANTHER BNAA09G05590D PROTEIN 15 566 - -
Ahy11g2012 655 SUPERFAMILY Arginase/deacetylase 16 363 IPR023696 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2012 Ahy-Chr11 128110147 128139643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2012 K11406 - gmx:100788831 1076.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2012 11 128110147 128139643 Ahy11g2012 11 128110147 128139643 ECH
Ahy11g2012 11 128110147 128139643 Ahy1g2904 1 110020521 110042401 hybridization