Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1951 ATGAGCTCCTCGCCCCATCGTTCTCGCGGCGGCAACGGGAACGGAGACGGTGGAGATAATAGGCCGAGATTCTTCGACGCAAAAACGAAGATCAAGTGCTGGAACAACGCCGAAATCGTTCCCGGCCGCCACCCTGAGAGGTGGCGCAAAGACGCCGCTGGCAACATTGTTTGCAAGCGCTTCAAAGACTGCCTCGGCTGCCTCTGCTACGAGTACGATCACATCGTCCCCTTCTCCAAAGGGGGTGAATCCACTGAAGAAAATTGTCAGATACTTCAGTCAAGAGTGAACAGATTCAAATCAAATAAATATCAGGTTGATGCTGATCAACTCAAAGGATACTCTTGTGATGTTATCTTTACTGACAAGGAGCTCGACATAATCGAGATGGCTGTTTATGGCGATGTTATCCGGCCAGGAAACCAGTGCCGTTGCAGAACTGTTGCCGAGATGCTTGGCAAATACAAGTCTAAAGATGAGACAACTGCATGCAAGTTGCCATAG 504 0.496 MSSSPHRSRGGNGNGDGGDNRPRFFDAKTKIKCWNNAEIVPGRHPERWRKDAAGNIVCKRFKDCLGCLCYEYDHIVPFSKGGESTEENCQILQSRVNRFKSNKYQVDADQLKGYSCDVIFTDKELDIIEMAVYGDVIRPGNQCRCRTVAEMLGKYKSKDETTACKLP* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1951 167 Pfam HNH endonuclease 71 94 IPR002711 GO:0003676|GO:0004519
Ahy11g1951 167 Gene3D - 34 116 - -
Ahy11g1951 167 SMART HNH_5 52 98 IPR003615 -
Ahy11g1951 167 PANTHER F6A14.21 PROTEIN 18 167 - -
Ahy11g1951 167 MobiDBLite consensus disorder prediction 1 22 - -
Ahy11g1951 167 CDD HNHc 59 98 IPR003615 -
Ahy11g1951 167 PANTHER HNH ENDONUCLEASE 18 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1951 Ahy-Chr11 125614750 125616933 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1951 - - ahf:112722534 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1951 11 125614750 125616933 Ahy11g1951 11 125614750 125616933 ECH
Ahy11g1951 11 125614750 125616933 Ahy1g2932 1 110691783 110693995 hybridization