Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1930 ATGGGTCCGAACGAAGACCGATCCGAAATAGTGTTCTTCGACGTCGAAACAACCGTTCCAACCCGACCCGGTCAGGGTTTTGCGATTCTTGAGTTCGGAGCCATTCTTGTGTGCCCGAGAACGTTGACGGAGCTCCGAAACTACTCCACACTGGTTCGACCCGCCGACCTCTCACTCATTTCGCCCTTGTCGGAGCGCTGCAACGGTATCACCGCTGACGCCGTCGCCGCCGCACCTACCTTCGCTGACATCGCCGACGCGGTTTACGACCTCCTCCATGGCCGGATTTGGGCGGGTCACAATATCTTAAGATTCGACTGTGCTCGGATCAGAGAGGCATTTGCTGCTATCAATCAGCAAGCACCAGAGCCAAAGGGTGCTATTGACTCTCTGGTTGTGTTAACACAAAAATTTGGAAGAAGAGCTGGTAATATGAAGATGGCTTCTCTTGCTACATATTTCGGGCTTGGACAGCAAACACATAGGAGCTTAGATGATGTTCGAATGAATCTTGAAGTACTTAAATACTGCTCAACAGTTCTATTCTTGGAGTCTAGTCTCCCAGATATATTGACTGCAAACAGTTGGATTTCACCCAATGCTATTACCAGAAGTCGTAGTAACGGGAAATCTCCCATAGATGGAGGCTCATCAAATATGAACAAGGATTTTGTAATGTCATCATCTGCCACTGCAACCAAGGAAGAAAATCATCCAATACTTTCTCTTACAAGGGGCAATGCAAATGGAGCTGTCGTAGATACTGCACAGTCCAATATAGATAAACAAGACTCTTTCGATCTACGTACTCTTGGTGATGAAATACAAAAGTCCATTCAGTCTGATGTTGCCATGGATGAAAAACCCACACAAGAGTCAACTGAGATGTCTTCCTCATCTTTTGTGTCTCCAGCATGCAGCAGCTACGTTGTTCTAGAACCGGATGAAATATGTATTCCTTCTATTGATGCATCTCTTGTTCCATCTCTCTTTGGCAGTCGGAATATAGAATTACAGCACAGTGGTTTCCCCTTTCAGCTTCATTGCACTAGTCTGAAAGTTCGGTTTGGAATAAGCACAAAGTTTTACGATAATGCTGGTCGGCCGCGGTTAAATTTTGTAGTTGACGCATCACCGAGTTTATGTAAGGTTCTTGATGCATGTGACAGTGTTGTACAAAAGTTATCCGTGGATTCTGGAAGCAGCTCTGATTGGAGGCCAGTTGTTATTAGAAAAGAAGGCTTCTTCAACTATCCGACTGCCAGATTGCATATACCTACAGCAGTATGTGGAGACGTTGCCTTCTATGCCACTGAGATATATCAGAGAGAATCATCTGGCACTGTGCAAAGACTCCTCTTCAGCAAGTTTGATGCCGAAGAACTGGGTTCGTTGTTCACGCCTGGGACATTTGTGGACGCATTCTTCTCCCTAGATCCATATGACTATCAGCAGAATGCAGGGATCAAACTAGTTGCCAAAAAGTTGATTATCGATTGCAAGTAA 1506 0.4542 MGPNEDRSEIVFFDVETTVPTRPGQGFAILEFGAILVCPRTLTELRNYSTLVRPADLSLISPLSERCNGITADAVAAAPTFADIADAVYDLLHGRIWAGHNILRFDCARIREAFAAINQQAPEPKGAIDSLVVLTQKFGRRAGNMKMASLATYFGLGQQTHRSLDDVRMNLEVLKYCSTVLFLESSLPDILTANSWISPNAITRSRSNGKSPIDGGSSNMNKDFVMSSSATATKEENHPILSLTRGNANGAVVDTAQSNIDKQDSFDLRTLGDEIQKSIQSDVAMDEKPTQESTEMSSSSFVSPACSSYVVLEPDEICIPSIDASLVPSLFGSRNIELQHSGFPFQLHCTSLKVRFGISTKFYDNAGRPRLNFVVDASPSLCKVLDACDSVVQKLSVDSGSSSDWRPVVIRKEGFFNYPTARLHIPTAVCGDVAFYATEIYQRESSGTVQRLLFSKFDAEELGSLFTPGTFVDAFFSLDPYDYQQNAGIKLVAKKLIIDCK* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1930 501 MobiDBLite consensus disorder prediction 201 222 - -
Ahy11g1930 501 CDD DEDDh 11 175 - -
Ahy11g1930 501 MobiDBLite consensus disorder prediction 283 298 - -
Ahy11g1930 501 PANTHER PROTEIN NEN3 5 499 - -
Ahy11g1930 501 MobiDBLite consensus disorder prediction 279 298 - -
Ahy11g1930 501 Gene3D - 4 180 IPR036397 GO:0003676
Ahy11g1930 501 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 5 499 - -
Ahy11g1930 501 SUPERFAMILY Ribonuclease H-like 8 178 IPR012337 -
Ahy11g1930 501 SMART exoiiiendus 9 183 IPR013520 -
Ahy11g1930 501 Pfam Exonuclease 11 174 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1930 Ahy-Chr11 125113315 125116610 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1930 - - ccaj:109808157 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1930 11 125113315 125116610 Ahy11g1930 11 125113315 125116610 ECH
Ahy11g1930 11 125113315 125116610 Ahy1g2944 1 110864353 110867598 hybridization