Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1878 ATGTCCAACCCAGCTAGCTTCTGGACACAGGCTAACGCTCTTCTCCGCAAGAACTTAACTTACCAGAAACGCGATGTCAAGACCAACGTGAGGCTGGTGCTGTTCCCGGTGATCCTCGTCGTACTGCTCTACGCGCTCCAAACGGCGGTCGACATCGTGCAGAGAGCGTCGCTTCAAGACGAGGAGAAGACGAAGGCCGCCGCCTGCAAAGGCTGCGTCTGCGTTCACGACATCGGGCCCCATGCCAAGTGCCCGGATTCAGAGAAGGTGTGTGGGCCCCGATTCTTGGGCCAAGAGGATGCCAAGAAGTGTCCCGTACCCTACCCACCGGAGTGGCCTCCCCTTTTGCAACTTGACGTCGGCGACGGATTCTTCAGCAATGATGCCGCCCGCAATGTCACCATGCTCTTCACTGGCACTGACCAATTTTTTGGAGAAAGTTTATTTGGAACTATGTTCCCAACTGAGTTGAGTATAAATGAGTCTGATATCATGGCTAGTTTGGCATCAGTTGTTCTGGGAACTGAATTTGGGTTGGATTCAACCCTTTTTGTGGACCCTGCGTTAAGTATTAACTCTTATATCCTTTATCGTCTACAACAAGATCAGTGTAAGGTGAACTCTAGTTTCTCCTTTAACTTCAACGAGGGAGACTCCAAAATGATCCGAGATGTTAAGGTGAATTGTACTCAGGCTTTTACCTTATGGCGCAAGACTTTTTCTGATATATGGGATGAGCTACAAGTTGAAGATTGTGATGATGATACAACAGGTTACACGTTATACAAGAATCCTATTAGTGGAGCTTTTGACTTTCTAAATTCGAATAAGAATATTTTTAATGTTAGCTTTTTAATTTACAAACATGACAATAGAGATAAGATCAACTTGAGCCGCACTCCTCGTTCTGTAAATATGATATCAAATGCCTTCTTGAAGTTTTTGCTGGGAAATGGTACCAAGATGTTATTTGACTTTATAGAGGAAATGCCAAAACCTGCATCCTCAGACACAACAATGATTGATATAACTTCTCTCCTGGGTGGTTTGTTCTATACATGGGTCATCCTTCAACTGTTTCCTGTTATTCTGATATCGTTGGTGTATGAGAAGCAGCACAAAATAAGAATGATGATGAAAATGCATGGTCTTGGAGATGGACCATACTGGTTGATTTCCTATGCTTATTTTCTTGCCATTTCCATGGCCTACATGCTGTGCTTTGTGTTAATGGGTTCATTCTTTGGATTCCATTTCTTCAGAGAGAATAACTATGGAATCCAGTTTGTGTTTTATTTTATCTATGTAAACTTACAAATTGCCTCCGCATTTCTGGTGGCTGCCCTGTTTTCGAATGTTAAGCCTGCTACAGTTACAGCATATATAGTTGTCTTTGGAACTGGACTGGCAGCTGCCTTTCTTTTCCCAGATTTGATGAAGAATGATCTGTTTCCAAAAAAATGGATCATTGTTATGGAGTTGTATCCTGGGTTTGCTTTATTTCGCGGGCTAAATGAGTTTGCAGAATATGTCAGTGTTGGAAATAGTTCAGGGACCCTTGGCATGAGGTGGCAGGATCTGAATGATAGCACAAATGGCATGAAACAGATCTTAATCATCATGTCAATTGAGTGGATAGTTTTCCTTTTTGTTGCTTACTACCTTGATCAAGTTTCCTCATCAGCAAGTGGGAGAAGTCCATTTTTTTTCTTGAAAGGATTTCAGAAGAAGACACCTTTGTCTTCCCAAAAGGACAATATGCCAATACAGGGGTCAAGAGCCTTGGCTCAGATGGATAAACCTGATGTAATCCAAGAGAGAGAGAAAGTGGAGGAACTGCTACTTGAACCGGCCAGCAATCACAGGATAGTTTGCAACAAGCTGAGAAAAGTCTATCAGGGGAGGGACGGAAACCCGGATAAAGTAGCAGTGAGAGGCTTGTTCCTTGCTGTTCCTCAAGGGGAATGCTTTGGCATGCTTGGTCCCAATGGTGCTGGAAAGACTTCTTTTATTAGTATGATGATTGGTCTGACAAAGCCAACCTCTGGTACTGCATTTGTTCAAGGCATGGACATAAGAACTGATATGAATGGACTATACACAAACATGGGTGTATGCCCCCAACATAACTTGCTGTGGGAAAGGTTGACAGGGAGAGAGCACCTACTTTTCTATGGCAGACTTAAAAATCTCAAAGGTTCAGCCTTAACACAGGCAGTAGAAGAATCTTTGAAGAGTTTAAACCTTTTCAATGGAGGAGTTGCTGATAAACAAGTTGGAAAATACAGTGGAGGGATGAAGAGGAGGCTTAGCGTTGCAATTTCTTTGATTGGGAATCCCAATGTTGTTTATATGGATGAGCCAAGCACCGGATTAGACCCTGCATCAAGAAAACGCTTATGGGATGTTATTAAGACTGCCAAAAAGGATCGTGCAATTATTCTCACTACTCATTCCATGGAAGAGGCAGAGGCCTTGTGTGATCGATTAGGAATCTTTGTTGATGGTAGCTTGCAATGCATAGGAAATTCAAAGGAGTTGAAAGCAAGATATGGAGGAACTTATGTGTTGACAATGACAACACCTTGGGAGCATGAAAAGGAAGTGGAGAACATGGTACGGCTGCTATGTCCTAATGCTAACAAGATATACCATATTTCTGGGACTCAGAAGTTTGAGCTGCCTAAAGGGGAGGTTAGAATAGCTGATGTATTTGGAGCTGTTGATTTTGCAAAGAGAAACTTCACTGTTTCTGCATGGGGTTTAGCTGACACCACAATGGAAGATGTCTTCATTAAGGTTGCTCGTGGCGACCCCCATTCTCAAAACCTGTCATAA 2838 0.4295 MSNPASFWTQANALLRKNLTYQKRDVKTNVRLVLFPVILVVLLYALQTAVDIVQRASLQDEEKTKAAACKGCVCVHDIGPHAKCPDSEKVCGPRFLGQEDAKKCPVPYPPEWPPLLQLDVGDGFFSNDAARNVTMLFTGTDQFFGESLFGTMFPTELSINESDIMASLASVVLGTEFGLDSTLFVDPALSINSYILYRLQQDQCKVNSSFSFNFNEGDSKMIRDVKVNCTQAFTLWRKTFSDIWDELQVEDCDDDTTGYTLYKNPISGAFDFLNSNKNIFNVSFLIYKHDNRDKINLSRTPRSVNMISNAFLKFLLGNGTKMLFDFIEEMPKPASSDTTMIDITSLLGGLFYTWVILQLFPVILISLVYEKQHKIRMMMKMHGLGDGPYWLISYAYFLAISMAYMLCFVLMGSFFGFHFFRENNYGIQFVFYFIYVNLQIASAFLVAALFSNVKPATVTAYIVVFGTGLAAAFLFPDLMKNDLFPKKWIIVMELYPGFALFRGLNEFAEYVSVGNSSGTLGMRWQDLNDSTNGMKQILIIMSIEWIVFLFVAYYLDQVSSSASGRSPFFFLKGFQKKTPLSSQKDNMPIQGSRALAQMDKPDVIQEREKVEELLLEPASNHRIVCNKLRKVYQGRDGNPDKVAVRGLFLAVPQGECFGMLGPNGAGKTSFISMMIGLTKPTSGTAFVQGMDIRTDMNGLYTNMGVCPQHNLLWERLTGREHLLFYGRLKNLKGSALTQAVEESLKSLNLFNGGVADKQVGKYSGGMKRRLSVAISLIGNPNVVYMDEPSTGLDPASRKRLWDVIKTAKKDRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNSKELKARYGGTYVLTMTTPWEHEKEVENMVRLLCPNANKIYHISGTQKFELPKGEVRIADVFGAVDFAKRNFTVSAWGLADTTMEDVFIKVARGDPHSQNLS* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1878 945 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 626 860 IPR003439 GO:0005524
Ahy11g1878 945 CDD ABC_subfamily_A 623 848 - -
Ahy11g1878 945 ProSitePatterns ABC transporters family signature. 762 776 IPR017871 GO:0005524
Ahy11g1878 945 Pfam ABC transporter 649 789 IPR003439 GO:0005524
Ahy11g1878 945 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 5 938 IPR026082 GO:0016021|GO:0055085|GO:0140359
Ahy11g1878 945 SMART AAA_5 653 836 IPR003593 -
Ahy11g1878 945 Gene3D - 615 882 IPR027417 -
Ahy11g1878 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 623 851 IPR027417 -
Ahy11g1878 945 Pfam ABC-2 family transporter protein 323 554 - -
Ahy11g1878 945 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 5 938 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1878 Ahy-Chr11 122547937 122555404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1878 639 871 Calmodulin-binding Proteins AT2G36910 25.306 1.60e-14 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1878 - - gmx:100792897 1142.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1878 11 122547937 122555404 Ahy11g1878 11 122547937 122555404 ECH
Ahy11g1878 11 122547937 122555404 Ahy1g2984 1 111639657 111647393 hybridization